Probe CUST_3194_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_3194_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 22.412 | 3.38605 | 0.81994 | 0.124125 |
| ABA 1h | 23.5174 | 6.78663 | 0.899128 | 0.253867 |
| ACC 1h | 27.5817 | 4.92736 | 0.95126 | 0.151854 |
| BABA 1h | 21.6469 | 4.19184 | 0.788426 | 0.210075 |
| Chitin 1h | 22.9784 | 4.23397 | 0.904151 | 0.216058 |
| Epi 1h | 25.1935 | 4.8774 | 1.02717 | 0.171443 |
| SA 1h | 26.87 | 5.2917 | 0.923776 | 0.182332 |
| Me-JA 1h | 30.656 | 4.11665 | 1.34731 | 0.204928 |
| Control 6h | 39.5638 | 10.3106 | 1.33774 | 0.264837 |
| ABA 6h | 26.6293 | 10.5091 | 0.689532 | 0.509232 |
| ACC 6h | 21.0063 | 4.02991 | 0.653126 | 0.127481 |
| BABA 6h | 31.0098 | 8.22916 | 0.922958 | 0.285727 |
| Chitin 6h | 35.4942 | 6.27202 | 1.1855 | 0.168615 |
| Epi 6h | 30.5609 | 7.11 | 0.925694 | 0.345116 |
| SA 6h | 35.8909 | 18.7649 | 1.02307 | 0.857471 |
| Me-JA 6h | 44.7133 | 8.18373 | 1.58048 | 0.195698 |
Source Transcript PGSC0003DMT400000461 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +1 | 1e-30 | 129 | 69/111 (62%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |