Probe CUST_3276_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_3276_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 226.106 | 41.1629 | 0.421882 | 0.0974089 |
| ABA 1h | 364.534 | 57.56 | 0.776683 | 0.100482 |
| ACC 1h | 295.805 | 65.6054 | 0.52622 | 0.0972597 |
| BABA 1h | 749.466 | 206.05 | 1.36072 | 0.336873 |
| Chitin 1h | 783.515 | 128.159 | 1.64623 | 0.250252 |
| Epi 1h | 406.58 | 77.5064 | 0.87247 | 0.1784 |
| SA 1h | 630.894 | 156.49 | 1.10937 | 0.246573 |
| Me-JA 1h | 479.31 | 105.613 | 1.08795 | 0.140079 |
| Control 6h | 328.018 | 88.5273 | 0.577396 | 0.138325 |
| ABA 6h | 1418.04 | 258.429 | 2.49335 | 0.363138 |
| ACC 6h | 893.701 | 51.8908 | 1.50584 | 0.240832 |
| BABA 6h | 687.455 | 130.014 | 1.15246 | 0.172843 |
| Chitin 6h | 287.376 | 16.9185 | 0.523317 | 0.0307963 |
| Epi 6h | 275.416 | 64.2755 | 0.448018 | 0.0933318 |
| SA 6h | 968.567 | 56.023 | 1.89841 | 0.209886 |
| Me-JA 6h | 1070.51 | 262.964 | 1.97001 | 0.441487 |
Source Transcript PGSC0003DMT400000455 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +3 | 7e-54 | 198 | 106/206 (51%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |