Probe CUST_2909_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_2909_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 224.537 | 35.3474 | 0.430742 | 0.08793 |
| ABA 1h | 369.129 | 50.0909 | 0.805125 | 0.0723485 |
| ACC 1h | 269.892 | 93.3477 | 0.434357 | 0.185699 |
| BABA 1h | 731.236 | 186.977 | 1.37066 | 0.291873 |
| Chitin 1h | 748.037 | 108.202 | 1.60621 | 0.23372 |
| Epi 1h | 379.203 | 68.5588 | 0.830298 | 0.158525 |
| SA 1h | 596.338 | 117.162 | 1.10008 | 0.149345 |
| Me-JA 1h | 439.103 | 86.8721 | 1.02195 | 0.123967 |
| Control 6h | 346.106 | 91.5501 | 0.620803 | 0.144717 |
| ABA 6h | 1369.84 | 260.888 | 2.43533 | 0.38937 |
| ACC 6h | 897.555 | 72.0422 | 1.53123 | 0.283035 |
| BABA 6h | 672.306 | 136.683 | 1.13869 | 0.193589 |
| Chitin 6h | 267.9 | 19.5596 | 0.492956 | 0.0482449 |
| Epi 6h | 261.986 | 67.2954 | 0.430582 | 0.102666 |
| SA 6h | 899.014 | 52.1039 | 1.78722 | 0.287005 |
| Me-JA 6h | 1040.35 | 223.704 | 1.97039 | 0.387663 |
Source Transcript PGSC0003DMT400000458 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +1 | 0.0 | 551 | 299/488 (61%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |