Probe CUST_2943_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_2943_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 203.046 | 28.0445 | 0.409539 | 0.0706455 |
| ABA 1h | 364.284 | 50.1794 | 0.831072 | 0.0716052 |
| ACC 1h | 265.664 | 67.0475 | 0.491008 | 0.115895 |
| BABA 1h | 710.956 | 197.035 | 1.3693 | 0.343467 |
| Chitin 1h | 699.986 | 87.7793 | 1.57872 | 0.174924 |
| Epi 1h | 355.316 | 65.998 | 0.812033 | 0.160973 |
| SA 1h | 627.302 | 155.221 | 1.1792 | 0.238079 |
| Me-JA 1h | 461.438 | 110.952 | 1.1051 | 0.169793 |
| Control 6h | 359.156 | 84.6487 | 0.689215 | 0.126643 |
| ABA 6h | 1383.83 | 278.167 | 2.5644 | 0.428824 |
| ACC 6h | 813.729 | 47.2169 | 1.46035 | 0.218923 |
| BABA 6h | 668.529 | 113.944 | 1.19791 | 0.157221 |
| Chitin 6h | 286.338 | 20.6735 | 0.551488 | 0.0401411 |
| Epi 6h | 260.586 | 77.2296 | 0.432314 | 0.125538 |
| SA 6h | 863.513 | 50.0173 | 1.79791 | 0.178486 |
| Me-JA 6h | 1036.28 | 244.088 | 2.03134 | 0.425722 |
Source Transcript PGSC0003DMT400000457 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +3 | 0.0 | 732 | 394/635 (62%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |