Probe CUST_3208_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_3208_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 224.666 | 41.1268 | 0.459642 | 0.0994624 |
| ABA 1h | 336.221 | 35.2405 | 0.7996 | 0.0659289 |
| ACC 1h | 263.62 | 70.8808 | 0.497787 | 0.129453 |
| BABA 1h | 694.069 | 167.487 | 1.4211 | 0.269497 |
| Chitin 1h | 717.84 | 96.79 | 1.66964 | 0.221175 |
| Epi 1h | 350.402 | 61.1926 | 0.832667 | 0.154108 |
| SA 1h | 631.228 | 116.657 | 1.26224 | 0.163115 |
| Me-JA 1h | 406.664 | 83.6787 | 1.01994 | 0.12722 |
| Control 6h | 334.364 | 92.9938 | 0.642977 | 0.159367 |
| ABA 6h | 1324.35 | 242.294 | 2.55263 | 0.386721 |
| ACC 6h | 814.457 | 69.2821 | 1.50007 | 0.261671 |
| BABA 6h | 652.394 | 110.225 | 1.20812 | 0.163669 |
| Chitin 6h | 263.141 | 15.669 | 0.524989 | 0.0312081 |
| Epi 6h | 284.614 | 68.1105 | 0.508559 | 0.109882 |
| SA 6h | 880.675 | 50.9955 | 1.89402 | 0.274006 |
| Me-JA 6h | 1035.27 | 268.938 | 2.07391 | 0.488047 |
Source Transcript PGSC0003DMT400000454 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +2 | 3e-47 | 178 | 87/129 (67%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |