Probe CUST_2966_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
Microarray Signals from CUST_2966_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 37.5854 | 5.81214 | 1.22422 | 0.139264 |
| ABA 1h | 33.2821 | 6.01001 | 1.21415 | 0.196824 |
| ACC 1h | 22.5651 | 6.01461 | 0.671203 | 0.168748 |
| BABA 1h | 30.8375 | 10.0503 | 0.956556 | 0.253591 |
| Chitin 1h | 18.0425 | 3.89178 | 0.63523 | 0.212552 |
| Epi 1h | 26.5833 | 4.41449 | 1.00052 | 0.142028 |
| SA 1h | 25.5935 | 3.47135 | 0.828853 | 0.113535 |
| Me-JA 1h | 34.3889 | 5.15179 | 1.38043 | 0.155681 |
| Control 6h | 39.0303 | 9.68023 | 1.20535 | 0.254934 |
| ABA 6h | 43.2124 | 8.5538 | 1.29771 | 0.248298 |
| ACC 6h | 34.9826 | 10.5478 | 0.93045 | 0.171769 |
| BABA 6h | 36.8866 | 8.1699 | 1.04781 | 0.219014 |
| Chitin 6h | 34.2569 | 4.41707 | 1.05736 | 0.149079 |
| Epi 6h | 35.4943 | 7.42554 | 1.01153 | 0.229909 |
| SA 6h | 26.8583 | 12.8566 | 0.735981 | 0.534571 |
| Me-JA 6h | 53.6779 | 13.2771 | 1.67824 | 0.337334 |
Source Transcript PGSC0003DMT400000460 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +3 | 4e-52 | 195 | 94/127 (74%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |