Probe CUST_2828_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
All Microarray Probes Designed to Gene DMG400000156
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2909_PI426222305 | JHI_St_60k_v1 | DMT400000458 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2966_PI426222305 | JHI_St_60k_v1 | DMT400000460 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
| CUST_2943_PI426222305 | JHI_St_60k_v1 | DMT400000457 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3276_PI426222305 | JHI_St_60k_v1 | DMT400000455 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_2828_PI426222305 | JHI_St_60k_v1 | DMT400000459 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3208_PI426222305 | JHI_St_60k_v1 | DMT400000454 | GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT |
| CUST_3194_PI426222305 | JHI_St_60k_v1 | DMT400000461 | GGATAACTTATCCCGGGATAAATAGGTAAATGACAAAAATGTCTCTTTCAACCCTTTTGT |
Microarray Signals from CUST_2828_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 215.83 | 39.0941 | 0.426828 | 0.0964054 |
| ABA 1h | 381.571 | 67.0377 | 0.855687 | 0.131076 |
| ACC 1h | 253.892 | 60.3338 | 0.474853 | 0.097444 |
| BABA 1h | 724.03 | 194.469 | 1.40156 | 0.330407 |
| Chitin 1h | 698.509 | 100.209 | 1.56654 | 0.235609 |
| Epi 1h | 358.339 | 49.1353 | 0.833346 | 0.112971 |
| SA 1h | 612.451 | 129.477 | 1.17085 | 0.182109 |
| Me-JA 1h | 442.074 | 74.411 | 1.08407 | 0.088747 |
| Control 6h | 328.945 | 83.4932 | 0.620177 | 0.136337 |
| ABA 6h | 1293.16 | 275.161 | 2.37532 | 0.440554 |
| ACC 6h | 816.266 | 50.4288 | 1.45716 | 0.223044 |
| BABA 6h | 672.597 | 118.766 | 1.20013 | 0.174338 |
| Chitin 6h | 295.596 | 17.6287 | 0.568815 | 0.0338367 |
| Epi 6h | 271.924 | 81.3172 | 0.453323 | 0.127574 |
| SA 6h | 874.767 | 50.7457 | 1.81518 | 0.283096 |
| Me-JA 6h | 1051.36 | 287.974 | 2.02237 | 0.508078 |
Source Transcript PGSC0003DMT400000459 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01770.1 | +1 | 0.0 | 614 | 337/562 (60%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632 |