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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32677_PI390587928Hv_44K_v2GCCAAGTATTACTTACTAATGCCCGCAAAGTATCATTGTGTATTATATTTTCTATGGAGC123GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36873427352e-242615 - 267410060 / 60plus ABC12319 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127
MLOCAK36573521673e-212000 - 20599758 / 60plus ABC04150 ABC08511 ABC09815 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127
MLOCAK36794234533e-213212 - 32719758 / 60plus ABC04150 ABC08511 ABC09815 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127
JLOC1JLOC1_42276.12622e-21197 - 2569758 / 60plus
JLOC1JLOC1_1827.12572e-21163 - 2229758 / 60plus
Harvest21ABC397384153e-25124 - 18310060 / 60minusABC39738
Harvest21ABC383385693e-25138 - 19710060 / 60minusABC38338
Harvest21ABC1562915156e-221335 - 13949758 / 60plusABC15629
Harvest21ABC123206616e-22416 - 4759758 / 60plus
Harvest35U35_432594153e-25124 - 18310060 / 60minus
Harvest35U35_425895693e-25138 - 19710060 / 60minus
Harvest35U35_454346636e-22416 - 4759758 / 60plus
Harvest35U35_746510456e-22865 - 9249758 / 60plus
Harvest35U35_25865036e-22412 - 4719758 / 60plus



Contig Sequence (415 bp)

>U35_43259 415 Hv_44K_v2
TTTTTTTGCAAAGTTGCATAACAAATTTCATGATCCATATATCAAAATTCCATAGCATCC
ATACATCCAAAATTCCATAGCATCCATATATACATATAGTTCCATAGCATCCATACATAC
ATAGCTCCATAGAAAATATAATACACAATGATACTTTGCGGGCATTAGTAAGTAATACTT
GGCACTAAACCAAATGCCTTCATGTCCATATCGTAGTCCAAAGGGCATCCGTGTGGCAAT
GGGGGGGTTCATCCTCCTGGGTGGAATCACCGGCGACGTCCTCGTCCTCCCGTCGTCGTC
CTACACACTGGTAAGCCAATCTCTTGTTTCAGCTTTAGCCTTCTCTCTAGGATCAGTTTT
CGGGTGGTGTCCTAAGCCTTCTTTCAAGAAGGGCTTAGTTTTAGTTTCCTTCTCA



Homology of Contig U35_43259 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None