barSeed - Barley Seed Development Database

Probe ABC38653

Source Contig ABC38653

barSeed

Links

Affymetrix Source Sequence (572 bp)

>ABC38653 572
CTTCATCATCAAATTTGTGATACATATTTGGTGAACATTTTTTCTCCTATGTTATTCAAT
AAAATCTATATGATTTCTATTATTGACATAAAAAAATATGACCTAAATTACCTCTAGGTA
TATGCAGAATTGCAGATGCCATCTACAAGTGATTTCTATTCTTGACATAACAAGATGAGC
TAAATTACTTCTACCTTTTCCAACTCAGACTTGTTAACTATTGTTTCATACTTTTGTTAG
CATATCAGCAAGTCCGAAATTGTGAAGCATTTCTATTCTTATATGTTCATTCTTATTTTT
TGCACAGGTGAAGTGCGAATCCAAGTCCGAAGCTGTGAAGCATATCCCCAAAGAGTAGCA
TATTATGTATTGTAGTTGTAGGCAGTAGTAGGCTTATTTGGGTTGTAGTATAATGTAATG
ATTGTAATAGACTAATGTAGTGTTGTTTTGGACGAATTCCATTTGCTCTTTGGATTCTTT
GGATTCTTCAAAATAATGATTTTGTATGTGATTTGAATACCTCGAAAAAGGTAACCTGGC
AAAGGGGTTCAAGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_51332.1	1660	0.0	1050 - 1596	98	545 / 556	CUST_10281_PI390587928	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_28721.2	1297	4e-110	967 - 1245	92	266 / 288	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_79966.1	321	4e-105	60 - 319	93	250 / 269	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC45008 ABC45560
MLOC_72123.3	840	6e-99	549 - 827	90	259 / 288	CUST_39297_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_28721.1	397	2e-94	141 - 384	92	233 / 253	None	ABC01488 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.3	1554	5e-85	10 - 251	90	226 / 251	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.4	1884	5e-85	10 - 251	90	226 / 251	CUST_40490_PI390587928 CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.5	1219	5e-85	9 - 250	90	226 / 251	CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.6	1349	5e-85	9 - 250	90	226 / 251	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.1	1134	5e-85	11 - 252	90	226 / 251	CUST_40490_PI390587928 CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.7	1966	5e-85	5 - 246	90	226 / 251	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.2	1017	5e-85	11 - 252	90	226 / 251	CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.8	1963	2e-84	1 - 241	90	225 / 250	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
AK371426	1694	2e-83	1429 - 1670	90	225 / 251	CUST_40490_PI390587928 CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.3	1334	2e-83	1079 - 1319	90	225 / 251	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.4	2702	2e-83	2447 - 2687	90	225 / 251	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_21799.2	1426	2e-83	16 - 257	90	225 / 251	CUST_7614_PI390587928	ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_21799.1	1275	2e-83	16 - 257	90	225 / 251	CUST_7614_PI390587928	ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.9	1333	8e-83	1 - 238	90	222 / 247	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.5	1425	3e-82	1187 - 1425	90	223 / 249	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.1	2025	1e-81	1788 - 2025	90	222 / 248	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.10	1847	1e-81	1 - 236	90	220 / 245	CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.11	853	4e-81	1 - 235	90	219 / 244	CUST_40490_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.8	2654	5e-80	2420 - 2654	89	219 / 245	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.7	2115	8e-78	1885 - 2115	89	215 / 241	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_72123.2	237	1e-76	5 - 237	89	215 / 242	None	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_22501.1	237	1e-76	60 - 237	96	171 / 178	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_72123.1	418	4e-76	182 - 416	89	216 / 244	None	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.6	2060	2e-74	1878 - 2060	95	173 / 183	None	ABC01488 ABC04556 ABC05320 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.2	1382	5e-70	1190 - 1360	95	162 / 171	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_44866.1	330	6e-69	158 - 330	94	163 / 173	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_23001.1	297	1e-66	1 - 163	95	155 / 163	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC45008 ABC45560 ABC47039
MLOC_9758.1	344	2e-53	2 - 134	95	127 / 133	None	ABC23356 ABC30053 ABC38653 ABC45560
MLOC_49319.1	279	8e-53	27 - 167	94	132 / 141	CUST_1552_PI390587928	ABC23356 ABC30053 ABC38653