barSeed - Barley Seed Development Database

Probe ABC23356

Source Contig ABC23356

barSeed

Links

Affymetrix Source Sequence (911 bp)

>ABC23356 911
TTGATTCTCTTTTCTCTTCGCCTCTTGTGGCGACCACTTTGTCGTTTCCGTCTCGACCTC
AGATTTTGTCTCCTGTCCTACAGCCTGCGGCGATAAAAAAATCGGCGTCGAACCTGACCA
TAATATGTTTGTTTCCTCTCATGCCACTTCTATATGATCATAATATGTTTGCAGAATGTT
ACTTTGTAGAATCATTGTTCAGCCTCTTTGTTTATATATGCGGAGTTCTTATTCATTTGA
TTTTATCCTTTTGGCAGGCACTTGTAGCTTAAACTATGAACATTTCTGTCACATACCGTC
TCTTTAAATCTGAATCTTGATTGCTTCTGTTTCACATGTCAGTATACTGTACATCAAAAA
AATCTTAGCTAGTTTGAGAAAATTTTAGCCGCTCCATAAACACATACTAGTTAATGTTAG
TCATACTATTTATGTACATTTCATTTGGTGTCAATTCTTGCTTCTAAGTTATTGGATCCC
TCATTGACCATTGTTTGATGTTCTCGACACATTCTTATTCTTACATGTTCATTCTTACTT
TTTGCACACGTGAAGTGCGAATCCAAGTCCGAAGCTGTGAAGCATATCAGCAAAGAGTAG
CATATTATGTATTGTAATTGTAGGCAGTAGTAGGCTTATTTGGGCTGTAGTACTACTTAT
TTGGGCTGTAGTATAATGTAACGATTGTAATAGACTAATGTAGTGTTGTTTTGGATGAAT
TACATGTTCATTCTTACTTTTTGCACACGTGAAGTGCGAATCCAAGTCCGAAGCTGTGAA
GCATATCAGCAAAGAGTAGCATATTATGTATTGTAATTGTAGGTAGTAGTAGGCTTATTT
GGGCTGTAGTATAATGTAACGATTGTAATAGACTAATATAGTGTTGTTTTGGACGAAAAA
AAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_28721.2	1297	2e-75	976 - 1154	96	171 / 179	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_25341.2	1697	0.0	1301 - 1697	99	393 / 397	CUST_26681_PI390587928 CUST_14215_PI390587928	ABC23356
MLOC_25341.1	1428	0.0	1032 - 1428	99	393 / 397	CUST_14215_PI390587928	ABC23356
MLOC_9758.1	344	1e-157	1 - 344	96	330 / 344	None	ABC23356 ABC30053 ABC38653 ABC45560
MLOC_44866.1	330	1e-67	167 - 330	95	156 / 164	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_23001.1	297	5e-67	1 - 154	97	149 / 154	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC45008 ABC45560 ABC47039
MLOC_77432.1	234	3e-108	1 - 234	97	228 / 235	None	ABC23356
MLOC_22501.1	237	2e-70	69 - 237	95	161 / 169	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_79966.1	321	1e-78	69 - 246	97	172 / 178	None	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC45008 ABC45560
MLOC_76145.6	2060	6e-71	1888 - 2060	95	164 / 173	None	ABC01488 ABC04556 ABC05320 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_72123.3	840	5e-72	559 - 736	94	168 / 178	CUST_39297_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_51332.1	1660	6e-56	1320 - 1459	95	134 / 141	CUST_10281_PI390587928	ABC01488 ABC23356 ABC30053 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_28721.1	397	4e-68	141 - 293	97	149 / 153	None	ABC01488 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.8	2654	6e-66	2420 - 2574	96	149 / 155	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.7	2115	3e-64	1887 - 2035	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.1	2025	3e-64	1790 - 1938	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.5	1425	3e-64	1190 - 1338	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.2	1382	3e-64	1192 - 1340	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.3	1334	3e-64	1081 - 1229	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_76145.4	2702	3e-64	2449 - 2597	97	144 / 149	None	ABC01488 ABC04556 ABC05320 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_72123.1	418	1e-63	182 - 342	94	152 / 161	None	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_72123.2	237	1e-62	7 - 155	96	143 / 149	None	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.9	1333	2e-61	86 - 238	95	145 / 153	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.8	1963	2e-61	89 - 241	95	145 / 153	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
AK371426	1694	6e-61	1431 - 1579	95	142 / 149	CUST_40490_PI390587928 CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.3	1554	6e-61	101 - 249	95	142 / 149	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.4	1884	6e-61	101 - 249	95	142 / 149	CUST_40490_PI390587928 CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.10	1847	6e-61	86 - 234	95	142 / 149	CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.5	1219	6e-61	100 - 248	95	142 / 149	CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.11	853	6e-61	85 - 233	95	142 / 149	CUST_40490_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.6	1349	6e-61	100 - 248	95	142 / 149	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.1	1134	6e-61	102 - 250	95	142 / 149	CUST_40490_PI390587928 CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.7	1966	6e-61	96 - 244	95	142 / 149	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_45216.2	1017	6e-61	102 - 250	95	142 / 149	CUST_34613_PI390587928	ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_21799.2	1426	6e-61	107 - 255	95	142 / 149	CUST_7614_PI390587928	ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_21799.1	1275	6e-61	107 - 255	95	142 / 149	CUST_7614_PI390587928	ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
MLOC_60430.1	125	3e-59	1 - 125	100	125 / 125	None	ABC23356
MLOC_49319.1	279	6e-51	27 - 154	95	122 / 128	CUST_1552_PI390587928	ABC23356 ABC30053 ABC38653
MLOC_45216.12	1931	2e-55	2 - 158	92	145 / 158	CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC23356 ABC45008
MLOC_45216.13	1425	8e-55	1 - 156	92	144 / 157	CUST_40490_PI390587928 CUST_34613_PI390587928 CUST_3645_PI390587928	ABC01488 ABC23356 ABC45008