- Probe ABC06549
- Source Contig ABC06549
Affymetrix Source Sequence (850 bp)
>ABC06549 850 GGCACGGGTCAACCCAACCCCTCGCTCTCCCTCCCTGTCTCGCCCAATGGAGAGAGAGAG CTAGAGCGAGAGCTCTCCTCCTCCCTTCGAGATCACGGCCGTCACCTCCCTTCTGAGGAG CTTGCCACCTCCCTCCTCCTCTCGCCCACGGCCTCCCCCACGCCCTCCTCCTCTCGCCCC TCCCCTTCCCTCACTAGAAGGGAGAGAAGAACTAGAGGGAGGGAGATCCATCCTGATCCA TTCGGGGCTAGGGTTCGGGCGGGGCGTCGCCGGTGGCCTCTCTGCCCTTCTTCGACCGGA TCCGCCACCCCCACCTCACCTCCATCTCTCAGCCCACCTCGCACGAGCGCCCGGATGGTG GTGCGCGAGCCTCACTAGGAGGGATATCCATCTGGATCGGAACTAGGTGGTGCATGAGAG GCCGGAGCGCGCCGCCCACCTCACGCACACGGCGCTCGACGCGCTCGCCACCATCTGCAA CCCGCCGGTCAATGCTCTGCACCCCATCATCATCTAGGGGCTCAACTAGAAGAACGCCTT CGGCCTTCGGCCGCGATGACATCATTGCCGCCGTGCTCACCGATGTTGGCGTTTCATGTT TCTTCGTGAGCATCAGGACAAAGAAATCGGAAGAAGCATAGTTCTCGGAGTAATGAAGCC CTTTAAGTTGATCCTATTTGTATCTATGTAATATGATTGTAAACTTGTAGAGAAGATTGC TTCTTGTTGTTATCTGATTGTAAACTTCATGCTGATCACATTTGTATATGCGTTATATGA TGTAGCAGATTATATTGCTTCTTGTTGTAATTTGAAGTATTGCGTCTGTGTTTAAAAAAA AAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_63761.1 | 801 | 0.0 | 1 - 786 | 100 | 786 / 786 | CUST_1572_PI390587928 CUST_40157_PI390587928 CUST_15729_PI390587928 CUST_42070_PI390587928 | ABC06549 ABC42046 |
| MLOC_63762.2 | 798 | 0.0 | 2 - 781 | 99 | 779 / 780 | CUST_1572_PI390587928 CUST_40157_PI390587928 CUST_15729_PI390587928 CUST_42070_PI390587928 | ABC06549 ABC42046 |
| AK375808 | 1890 | 0.0 | 600 - 1260 | 100 | 661 / 661 | CUST_13629_PI390587928 CUST_40157_PI390587928 CUST_15729_PI390587928 CUST_42070_PI390587928 | ABC00003 ABC00255 ABC06549 ABC34401 ABC42046 |
| MLOC_63762.1 | 2031 | 6e-130 | 82 - 333 | 100 | 252 / 252 | CUST_1572_PI390587928 CUST_40157_PI390587928 CUST_40186_PI390587928 CUST_15729_PI390587928 CUST_42070_PI390587928 | ABC00122 ABC06549 ABC42046 |
| MLOC_63762.3 | 924 | 2e-144 | 1 - 278 | 100 | 278 / 278 | CUST_1572_PI390587928 CUST_40157_PI390587928 CUST_15729_PI390587928 CUST_42070_PI390587928 | ABC06549 ABC42046 |
| MLOC_21799.6 | 1012 | 9e-99 | 625 - 1005 | 85 | 323 / 382 | None | ABC06549 |
| MLOC_21799.2 | 1426 | 9e-99 | 1007 - 1387 | 85 | 323 / 382 | CUST_7614_PI390587928 | ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039 |
| MLOC_21799.5 | 1573 | 9e-99 | 1157 - 1537 | 85 | 323 / 382 | CUST_7614_PI390587928 | ABC06549 |
| MLOC_21799.1 | 1275 | 4e-92 | 918 - 1176 | 90 | 235 / 260 | CUST_7614_PI390587928 | ABC01488 ABC06549 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039 |