barSeed - Barley Seed Development Database

Probe ABC25612

Source Contig ABC25612

barSeed

Links

Affymetrix Source Sequence (881 bp)

>ABC25612 881
GGCGCAGACAGGCGAACGGAGGCCGGACACCCCTGTTTCGGTCGCCCTGTCCAAGGAAAA
CAGCCCATCTTCTTTCCCCACTTGCACTCCAAGCTAGCCTAATTAGTTTCGTCTGATTTT
GATTTTGGTTCATGTTTGAGGACGGGGATCTAAATTTGCATGGCTGGTTGCAGCGGCGGT
GCCATGGGAGGCCGGGAAGCCGCTATCGGGCGAGGAGGTGGAGGTGGCGCCGCCGCAGGC
CATGGAGGTGCGAGTCAGGATCCTCCACCGCACTCTGCCACACCGACGTCTACTTCTGGA
AGGCCAAGGGGCAAACTCCGGTTTTCCCTAGGATCTTGGGCCATGAAGCTGGAGGTATTG
TCGAGAGCGTTCCGGAGGGTGTGACCGAGCTCGTGCCAGGTGACCATGTCCTCCCGGTGT
TCACCGACGAGTGCAAGGAGTGTGCTCACTCCAAGTCAGACGAGAGCAACCTTTGCGACC
TCCTCAGGATCAACGTGGATCGTGGTGTGATGATCGGCGATGGGGAGTCTCGCTTCAGCA
TTAATGGGAAACCGATCTTCCACTTTGTTGGGATCTCCACCTTCAGTGAGTACACTGTGA
TCCATGTTGTGTGCCTCGCAAAGATCAACCCGGAGACGCCCCTTGACAAAGTTTGTGTTC
TCAGCTGTGGCATCTCAACCGGACTTGGTGCTACCCTTGTTAGGATACGAGTTGCATAGG
ATAAGGAAAGTGGTTTAAACTTGTTTCTATCTCTTCCTCTCTCTCTTATCTCATGTAACC
TCTTGTGAGGATCTCGACTTGTATCTCAAGGCATTGCCCATATAAATATATTGCGGCCCG
AGACAAAGGGTTTTACTATTCATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_8050.1	974	0.0	296 - 974	99	677 / 679	None	ABC00278 ABC00393 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_59323.1	1693	0.0	323 - 847	90	474 / 526	CUST_2721_PI390587928 CUST_3572_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_59323.2	1734	0.0	290 - 814	90	474 / 526	CUST_2721_PI390587928 CUST_3572_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
AK355092	1636	0.0	294 - 815	89	466 / 523	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612 ABC38566
MLOC_53566.2	1050	0.0	281 - 802	89	466 / 523	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_53566.1	1139	0.0	349 - 870	89	466 / 523	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
AK251236.1	1549	1e-107	135 - 653	80	420 / 522	CUST_2725_PI390587928 CUST_27475_PI390587928	ABC00268 ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612 ABC37216 ABC38668
MLOC_52816.1	681	1e-67	391 - 660	84	228 / 271	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_17871.1	1503	3e-64	107 - 296	91	172 / 190	CUST_2718_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612