barSeed - Barley Seed Development Database

Probe ABC00903

Source Contig ABC00903

barSeed

Links

Affymetrix Source Sequence (1306 bp)

>ABC00903 1306
GGTGACCGCGAAGAAGAAGAAGAAACAGCAGGGGAGATATCAACCGAAGTTCTTGGAGTG
AAATGGCGACCGCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCCTGGGAGGCCGGGA
AGCCGCTGTCGATGGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCA
AGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGCCAAA
CTCCGGTTTTTCCTAGGATCTTGGGCCATGAAGCTGGAGGCATTGTGGAGAGCGTCGGCG
AGGGCGTGACGGAGCTGGTGCCGGGAGACCATGTCCTCCCGGTGTTCACCGGAGAGTGCA
AGGAGTGTGCCCACTGCATGTCAGAGGAGAGCAACCTCTGTGACCTCCTCAGGATCAATG
TTGACCGTGGCGTGATGATCAGCGACGGGCAGCCCCGCTTCACCATCGACGGCAAACCCA
TCTTCCACTTCCTGGGGACGTCCACCTTCAGCGAGTACACCGTGATCCATGTCGGGTGCG
TCGCCAAGATCGACCCCGAGGCGCCCCTCGACAAAGTCTGCCTCCTTAGCTGTGGTATCT
CAACCGGCTCGGTGCGACGCTCAACGTCGCGAAACCGAAGAAGGGTATGGCGGTGGCGAT
TTTTGGTCTTGGAGCTGTAGGCCTCGCTCCATGGAAGGCGCCAGGTTGTCTGGCGCATCA
AGGATTATCGGCGTGGACTTGAACCCTGCAAAACACGAACAAGTAAGAAATTTGGCTGCA
CCGACTTTGTGAACCCCAAAGACCACACCAAGCCAGTGCAAGAGTGATCGTGGAGATGAC
CGATGGGGGAGTCGACCGGGCGGTGGAGTGCACAGGCAACGCCGACGCCATGATCTCCGC
CTTTGAATGCGTTCACGATGGTGGGGCGTGGCGGTGCTGGTGGGCGTGGCGCACAAGGAG
GCGGTGTTCAAGACCCACCCCATGAACTTCCTCAAGGAGAGGACGCTCAGGGGCACCTTC
TTCGGCAATTACAAGCCGCGCACCGGCCTCCCCGGCGTCGTCGACATGTACGTGAGGAAG
GAGCTGGAGCTGGACAAGTTCATCACCCACAGCGTGCCCTTCTCGCAGATCAACACGGCC
TTCGACCTCATGCTCAGGGGGGAAGGCCTGCGCTGCGTCATCAGGATGGAGGAGTAGAGT
AGAGCACCTGGCTGTTCTTCATCCCTCGCTGCTATTGTACAACACACATGTATCAGCTCT
TATGCAACCCCCCCTCCCTCTGTCTACTTATTCGAAATACCTATCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_17871.1	1503	1e-129	14 - 292	97	270 / 279	CUST_2718_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_59323.1	1693	0.0	291 - 1430	89	1017 / 1140	CUST_3572_PI390587928 CUST_2721_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
AK355092	1636	0.0	261 - 1402	88	1009 / 1142	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612 ABC38566
MLOC_17871.2	1037	0.0	178 - 821	96	618 / 644	None	ABC00393 ABC00816 ABC00903
MLOC_59323.2	1734	4e-119	1089 - 1463	87	328 / 375	CUST_3572_PI390587928 CUST_2721_PI390587928	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_53566.1	1139	0.0	316 - 1128	89	720 / 813	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_53566.2	1050	0.0	248 - 1013	89	684 / 766	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612
AK251236.1	1549	0.0	103 - 1235	80	917 / 1140	CUST_2725_PI390587928 CUST_27475_PI390587928	ABC00268 ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612 ABC37216 ABC38668
MLOC_8050.1	974	2e-156	466 - 974	86	442 / 512	None	ABC00278 ABC00393 ABC00654 ABC00816 ABC00903 ABC25612
MLOC_52816.1	681	8e-101	359 - 660	89	270 / 304	None	ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612