- Probe ABC15196
- Source Contig ABC15196
Affymetrix Source Sequence (1215 bp)
>ABC15196 1215 TGGGTACCCGGGCCCCTCCTCGTGCCGCTGACTCCTACTACCAGCTTCCCACTCCCACTC CCGCAGCGGGTGATCCATGGCCACGGCTTTCCGCCTCCCGCCTCTCCTCTCCTCGCGCGC CGCCCCTACCACCGCCGCCCGCGCTACCACCTGGAGGAATCGGACAGGATCGTTCACTCA CAGGGTCGCCGCGCAGCCTGACGACACTACCGCCACCACCTCCACCAGCACCACGCCGGC GCCGCCTACCGGGTTCACGCCTCCGGTTCCCAAGCGGTTCGAGGTCAAGCCCGGCCAGTC AAACAACATCGCCGGCGCCGCTCTCGCCTTGCCCTTCCGCCTCGGCACCGGCGTCTTCGT CCTAGGATATGGAGTGACACTTCTTGACGCTAACGAGATATCACCAGATCAGTATGCTTT GGATTTCCAAGGTCGGAAGGTGAAAGAAACGTCGAAGGTGGGGCAGTGCCCTCGACCTGC TAAGCCTATTGAAATATACGAGTTTGAAGGATGCCCATTTTGTCGAAAGGTCAGAGAGAT GGTATCCGTCCTGGACCTTGATGTGTTATATTACCCTTGTCCTAAAGGCGGCCCAACCTT CCGTCCAAAGGTTCTAGAGATGGGCGGGAAGAAACAGTTTCCTTACATGGTGGATCCAAA CACAGGAGTCGCTATGTATGAATCAGATGACATCATAAATTACCTGGCAAAAACTTACGG TGATGGAAGCGTTCCGACTATGCTAAAACTTGGTCTATTGACAACAATAACGGCAGGGCT TGCATTGAGTGGGCGTAGCGGGAAGGGATCTTCCTACAGTCCTGCAAAGCTTCCATCCCA GCCAATAGAGATATGGGCATACGAGGGATCTCCTTTTTGTAAAATAGCCCGTGAGACCCT TGTCGAATTGGAGTTGCCACACTTGCTACACAGCTGTGCGCGTGGCAGTCCCAAGCGACA GGATTTTTTCAAGAAATATGGTCTTTTTCAGGCGCCTTATATCGAGGATCCTAACACGGG GGTGAAGATGTTCGAGAGCGCCGACATCGTAGAGTATTTGAGGGCAACATATGCTGCTTG AGAATCACTGACACTTTCTTTCTCAGTAACATTTGAGCTCATAGCCTGCCATGTCTCTTC TCATGTAATCTCATGGTTGTAGATCACATTCTTTATTACATAGGAAAAATGATGAATCCT CGATTATGTGAGGTG
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK368562 | 1246 | 0.0 | 44 - 1239 | 99 | 1194 / 1197 | CUST_6320_PI390587928 | ABC15196 ABC17921 |
| AK358722 | 1269 | 0.0 | 4 - 1145 | 99 | 1140 / 1142 | CUST_6320_PI390587928 | ABC15196 ABC17921 |
| MLOC_12061.2 | 1365 | 0.0 | 259 - 1244 | 82 | 820 / 1001 | CUST_12262_PI390587928 | ABC15196 ABC17921 |
| MLOC_4141.1 | 809 | 3e-179 | 441 - 787 | 99 | 346 / 348 | None | ABC15196 |
| MLOC_4141.2 | 570 | 3e-179 | 83 - 429 | 99 | 346 / 348 | None | ABC15196 |
| MLOC_59789.2 | 310 | 1e-148 | 24 - 309 | 100 | 286 / 286 | None | ABC15196 |
| MLOC_2275.3 | 3301 | 1e-148 | 2843 - 3128 | 100 | 286 / 286 | None | ABC15196 ABC17921 |
| MLOC_66194.1 | 2442 | 4e-148 | 43 - 327 | 100 | 285 / 285 | CUST_6320_PI390587928 CUST_8647_PI390587928 CUST_13250_PI390587928 | ABC15196 ABC20409 ABC22174 ABC38352 |
| MLOC_2275.1 | 3439 | 4e-148 | 3024 - 3308 | 100 | 285 / 285 | None | ABC15196 ABC17921 |
| MLOC_12061.4 | 466 | 4e-123 | 1 - 464 | 84 | 392 / 466 | None | ABC15196 ABC17921 |
| MLOC_12061.3 | 1342 | 4e-108 | 211 - 561 | 87 | 307 / 353 | None | ABC15196 ABC17921 |
| MLOC_66195.1 | 5505 | 7e-116 | 183 - 409 | 100 | 227 / 227 | CUST_6320_PI390587928 CUST_8647_PI390587928 CUST_4934_PI390587928 CUST_13250_PI390587928 CUST_31433_PI390587928 | ABC15196 ABC20409 ABC22174 ABC38352 |
| MLOC_2275.2 | 3206 | 1e-109 | 2844 - 3059 | 100 | 216 / 216 | None | ABC15196 ABC17921 |
| MLOC_2275.4 | 3569 | 3e-109 | 3019 - 3233 | 100 | 215 / 215 | None | ABC15196 ABC17921 |
| MLOC_12061.1 | 1184 | 6e-102 | 719 - 1183 | 81 | 389 / 478 | CUST_12262_PI390587928 | ABC15196 ABC17921 |
| MLOC_59789.3 | 163 | 4e-79 | 3 - 163 | 100 | 161 / 161 | None | ABC15196 |
| MLOC_59789.1 | 396 | 1e-58 | 43 - 166 | 100 | 124 / 124 | None | ABC15196 |