barSeed - Barley Seed Development Database

Probe ABC08764

Source Contig ABC08764

barSeed

Links

Affymetrix Source Sequence (998 bp)

>ABC08764 998
CCCCCCCCCACCCCTCGTCCTCCCCGCCGCGCACCAAACCCTAGCCAGCCCCGCCGATCC
CAATGGCCGCCGCGCACCACCGGCCCCTCCACGCCCTCCTCGGCGGCGGCGCAGCCGCCG
ACCTGCTCCTCTGGAGGCGGAGGAACGCCTCCGCGGCGGCCGTCGCGGGCGCCACGCTCG
TCTGGTTCGTCTTCGAGCGCGCCGGGTACAGCCTCGCGTCGGTCCTCTCCAACGCCCTCC
TCCTCCTCGTCGTCATCCTCTTCTTCTGGGCCAAGTCCGCCTCGCTGCTCAACAGACCTC
TTCCACCACTGCCTAATCTAGAGGTCTCAGATGTGGTCGTTCAGAAAGCTGCAGATCGGG
CTCTTGTATGGGTAAACAAGGTGTTGGCTGTTGCCCATGACATTGCCATCAAGAGAGACA
GGACAGTTTTTATAAAGGTTATAATGGTTCTATGGGTGGTTTCATGTATTGGGATGCTCT
TCAACTTCTTTACGCTCATTTACATTGGTGCACTACTCGCTCTGTTGGTTCCCCCGGTAT
ATGAGAGGCACCAAGAGGTTATTGATGAAAAGGTTGGTTTAGCACACAGCATACTGTCAA
GGCACTTGAATACCGTCATTAGCAAGACTGGGCAACCAACTAAACAAAAGAAGGCTGAGT
AGAAGAAATATTTTGTCCCATTTGGAAGCTCTCCAGTTGTCCAGTGCAGTTGGCCTCGTC
ATCAGAGTCTCTATACGGTGATCCATCCACCGCTGAGAGTATTTCTGGATATTCAGGGCA
TAATGTTTAACTGCTGATACGTGAGTTTAGATGCACGATCTTCAATCTGAGAAATGGAAT
GATCTGTATATTGTTTCTATGAACATGAAACTTGTTGAGGTTTACCATGGGTGCATCTTG
TGGATAACAACGTATACTTTTCCTCGCAACATTTTTTTCTCTACGTGCGACGTTTAGTTT
TGCATATACGATTGCGGTCCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK354190	1204	0.0	74 - 1055	99	974 / 982	CUST_25779_PI390587928	ABC08764 ABC40107
MLOC_74195.1	948	0.0	113 - 801	99	686 / 689	CUST_25779_PI390587928	ABC08764
MLOC_74195.3	512	0.0	118 - 510	100	393 / 393	None	ABC08764
MLOC_74195.2	629	8e-130	271 - 522	100	252 / 252	None	ABC08764
MLOC_45892.1	666	5e-92	476 - 659	100	184 / 184	None	ABC08764 ABC40107
MLOC_23736.1	2197	2e-81	126 - 308	97	177 / 183	None	ABC08764 ABC40107
AK369286	838	2e-80	251 - 434	96	177 / 184	CUST_25002_PI390587928 CUST_19886_PI390587928	ABC08764 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947