- Probe ABC06409
- Source Contig ABC06409
Affymetrix Source Sequence (1242 bp)
>ABC06409 1242 GGCAACATCCGCAGCTTCAACCTCTCCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATC GACCTCGCGCGCGACATGCTCCAGGTGCATCCCAACTCGAACGCTCTGGTGATCTCGACG GAGATCATCACGCCCAACTTCTACCACGGGAGCCGGCGGGACATGCTGCTGCCCAACTGC CTGTTCCGGATGGGCGCGGCGGCGATCCTGCTGTCGAACCGGCGGCGGGAGGCGCGGCGC GCCAAGTACAGGCTGGTGCACGTGGTGCGCACGCACAAGGGCGCGGACGACCGCGCGTAC CGGTGCGTGTACGAGGAGGAGGACGACGAGGGGCACTCGGGCATCTCCCTCTCCAAGGAG CTGATGGCCATCGCCGGCGAGGCGCTCAAGTCCAACATCACCACCATGGGCCCGCTGGTG CTGCCCATGTCGGAGCAGCTGCTCTTCTTCTTCCGCCTGGTGGGGCGCAAGGTGATCAAC AAGAAGTGGAAGCCCTACATCCCGGACTTCAAGCTGGCCTTCGAGCACTTCTGCATCCAC GCCGGCGGCCGAGCCGTCATCGACGAGCTGCAGAAGAACCTGGAGCTGTCGCCGCGGCAC GTGGAGGCGTCGCGGATGACGCTGCACCGGTTCGGCAACACCTCCAGCAGCTCGCTCTGG TACGAGCTCGCCTACATCGAGGCCAAGGGCCGCATGCGCAAGGGCGACCGCGTGTGGCAG ATCGGCTTCGGCAGCGGGTTCAAGTGCAACAGCGCCGTCTGGAAGTGCCTCCGCACCGTC AACACGCCCACCGACGGGCCATGGGACGACTGCATCCAGCGCTACCCCGTCCACATCCCG GAGGTCGTCAAGCTCTGACGGACGGGCTCGCCGCCGGCGGTCGCATGCACCGCCGTATCC TTCCCTGAGTCGCCTGCATGTACGTACGTGTCCCCCAAAACCTGGAGCTCCGTGGGGGGG CCCCGACCAAATTAAACCAGTCTCTCTCCTTCGCTTTTTTTTTCCTTTTTGTTTCTCTAT TTATTTATGTTTTCTTTGCGATAAATTAAATTAAATGGATACTCGTGGGATGCGTCACAC AAGGAGGGGATCGGTTCATTCACAAGGAGGTTGATTACACGTATATTTATATTGGATATT GGATTGGACGACGCTAACGTGGGCGTGGTTGTTAAATTGTTTGTGTCACAGATTTTCACT GCAGTGAAAGGAATACTTTCATTGCAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_51583.2 | 2253 | 0.0 | 1 - 1092 | 99 | 1089 / 1092 | None | ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 ABC22900 |
| MLOC_51583.1 | 904 | 0.0 | 10 - 904 | 99 | 891 / 895 | None | ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 |
| MLOC_68976.1 | 2852 | 0.0 | 974 - 1800 | 81 | 680 / 840 | CUST_908_PI390587928 CUST_4009_PI390587928 CUST_909_PI390587928 | ABC04206 ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 |
| MLOC_74290.1 | 2058 | 5e-172 | 814 - 1603 | 81 | 643 / 797 | CUST_25872_PI390587928 | ABC04206 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18311 ABC20877 ABC22130 ABC41736 |
| AK363216 | 1962 | 1e-163 | 880 - 1630 | 81 | 611 / 757 | CUST_33615_PI390587928 CUST_19846_PI390587928 | ABC05663 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18569 ABC20877 ABC22130 ABC41736 |
| MLOC_17499.1 | 1880 | 2e-146 | 797 - 1630 | 78 | 671 / 855 | None | ABC05664 ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 ABC41736 |
| MLOC_60050.1 | 1101 | 4e-143 | 445 - 1101 | 81 | 536 / 663 | CUST_33615_PI390587928 | ABC05663 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18569 ABC20877 ABC22130 ABC41736 |
| MLOC_8870.1 | 1804 | 2e-141 | 302 - 1063 | 79 | 613 / 777 | CUST_26156_PI390587928 | ABC05664 ABC06409 ABC17547 ABC18311 ABC41146 ABC41736 |
| MLOC_64948.1 | 2031 | 2e-117 | 829 - 1589 | 77 | 595 / 772 | CUST_7396_PI390587928 CUST_16006_PI390587928 CUST_26157_PI390587928 CUST_17277_PI390587928 | ABC06409 ABC15518 ABC18569 |
| MLOC_8115.1 | 1385 | 2e-111 | 443 - 1189 | 77 | 590 / 767 | None | ABC05664 ABC06409 ABC18311 ABC41146 ABC41736 |
| MLOC_64948.2 | 1457 | 3e-110 | 387 - 1152 | 77 | 595 / 777 | CUST_7396_PI390587928 CUST_26157_PI390587928 | ABC06409 ABC15518 ABC18569 |
| MLOC_64948.3 | 1557 | 3e-100 | 520 - 1211 | 77 | 538 / 702 | CUST_7396_PI390587928 CUST_26157_PI390587928 | ABC06409 ABC15518 ABC18569 |
| MLOC_20557.1 | 1299 | 5e-88 | 9 - 493 | 79 | 390 / 492 | CUST_22949_PI390587928 | ABC06409 ABC18311 ABC23137 ABC36062 |