- Probe ABC20877
- Source Contig ABC20877
Affymetrix Source Sequence (546 bp)
>ABC20877 546 GGCGTTCGAGCACTTCTGCATCCACGCGGGCGGGCGCGCGGTGATCGACGAGCTCCAGCG CAGCCTCAGGCTGTCGGACGAGCAGGTGGAGGCGTCGAGGATGACGCTGCACCGGTTCGG CAACACGTCCAGCAGCTCGCTGTGGTACGAGCTTGCATACATCGAAGCCAAGGGACGCAT GCGCAAGGGCGACCGTGTGTGGATGATCGGCTTCGGCTCCGGGTTCAAGTGCAACAGCGC CGCCTGGGAGTGCATTCGCCCGCCGGCGGCGCTCGACGGGCCCTGGGCCGCCTGCGCCCA CCGGTACCCCGTCGACGTCCCCGACGTGATCAAGCATTAGTAAAGCCGCATGCGCATTCG ATCCTACACACGGGCAGCCACTGCTTAGATTACTAGGCCTTGCACCATAAGTAGTTGCTT GCTTGCCCGATTCGCTCACTAAAGGACTATCAGTCTTATTTTTTCGTCATCATGTAACCG GCATGAGATTGTTAAGCCTCCTCATCCTGGAATTAATTATGGAACCCCTAAAAAAAAAAA AAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_17499.1 | 1880 | 7e-133 | 1287 - 1635 | 92 | 320 / 349 | None | ABC05664 ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 ABC41736 |
| AK358061 | 2918 | 1e-110 | 1231 - 1572 | 88 | 301 / 342 | CUST_26178_PI390587928 CUST_20270_PI390587928 | ABC05664 ABC18311 ABC20877 ABC22130 ABC41146 ABC41736 |
| MLOC_64056.1 | 2152 | 1e-110 | 1226 - 1567 | 88 | 301 / 342 | CUST_20270_PI390587928 CUST_26178_PI390587928 | ABC05664 ABC18311 ABC20877 ABC22130 ABC41146 ABC41736 |
| MLOC_51583.1 | 904 | 9e-82 | 276 - 613 | 83 | 282 / 339 | None | ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 |
| MLOC_51583.2 | 2253 | 9e-82 | 241 - 578 | 83 | 282 / 339 | None | ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 ABC22900 |
| MLOC_71252.1 | 1792 | 3e-81 | 1206 - 1471 | 87 | 232 / 266 | None | ABC05664 ABC20877 ABC41736 |
| AK363216 | 1962 | 3e-62 | 1383 - 1629 | 84 | 209 / 248 | CUST_19846_PI390587928 CUST_33615_PI390587928 | ABC05663 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18569 ABC20877 ABC22130 ABC41736 |
| MLOC_60050.1 | 1101 | 3e-62 | 446 - 692 | 84 | 209 / 248 | CUST_33615_PI390587928 | ABC05663 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18569 ABC20877 ABC22130 ABC41736 |
| MLOC_74290.1 | 2058 | 2e-59 | 1329 - 1570 | 84 | 204 / 243 | CUST_25872_PI390587928 | ABC04206 ABC05664 ABC06409 ABC06411 ABC15518 ABC17547 ABC18311 ABC20877 ABC22130 ABC41736 |
| MLOC_68976.1 | 2852 | 1e-55 | 1489 - 1735 | 83 | 206 / 249 | CUST_909_PI390587928 CUST_908_PI390587928 CUST_4009_PI390587928 | ABC04206 ABC06409 ABC17547 ABC18311 ABC20877 ABC22130 |