barSeed - Barley Seed Development Database

Probe ABC03287

Source Contig ABC03287

barSeed

Links

Affymetrix Source Sequence (787 bp)

>ABC03287 787
GAATCAACAAGCAATCCAACGCCGAGGAGATCGATCAGCGAGCGAGAATGGAGGGCAGGA
TGTTCGGGCTGGAGACCCCGCTGATGACGGCGCTGCAGCACCTGCTGGACATCCCGGACG
GCGAGGCCGGCGGAGTCGGTGTAGCCGGCGGCGAGAAGCAGGGCCCGACGCGCGCCTACG
TACGCGACGCGCGCGCCATGGCAGCCACCCCCGCCGACGTGAAGGAGCTGCCGGGCGCGT
ACGCTTTCGTGGTGGACATGCCGGGGCTCGGATCCGGCGACATCAAGGTGCAGGTGGAGG
ACGAGCGGGTGCTGGTCATCAGCGGTGAGCGCCGGAGGGAGGAGAAGGAGGACGCCAAGT
ACGTGCGGATGGAGCGACGCATGGGCAAGATGATGCGCAAGTTCGTGCTCCCCGAGAACG
CTGACATGGAGAAGATCGCGGCCGCGTGCCGCGACGGCGTGCTCACCGTCACCGTCGAGA
AGCTGCCGCCGCCCGAGCCTAAGAAGCCCAAGACCATCCAGGTCCAGGTCGCCTGAAAAT
GAGATGCATGGTGTGTGCGCGTCGAATCGAAGCAGAGTATTGAGTGGGTAGCGAGTTTGC
TGTGATGAGTGGTGGAGTGTCAGTCTTTTCGTTTCGTCTGCTAGAGGAGGGTGTGTCGTC
GGTTCGTGCGCAGGTGGTGATGGTTTGATGTTTCGGTAATGGAAATGGGGATGTTCTCCG
GTTAAAAAAAAAAAAAAAAAGCGTATCTCTTGGCCACATAAAAAAAAAAAAAAAAGGGCG
GCCCCGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_32229.1	1072	0.0	124 - 840	92	670 / 729	CUST_9889_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK355146	782	0.0	69 - 575	93	474 / 507	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375791	733	0.0	72 - 615	92	502 / 548	CUST_9890_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375970	746	0.0	69 - 597	91	498 / 546	CUST_9887_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_42046.1	343	1e-176	1 - 343	99	341 / 343	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_75844.1	667	4e-122	1 - 286	94	270 / 286	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_4817.1	602	8e-109	1 - 264	93	254 / 272	CUST_23819_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_651.1	201	1e-82	2 - 201	95	189 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_47287.1	198	2e-80	4 - 198	94	187 / 198	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_78762.1	425	1e-77	186 - 424	89	212 / 239	None	ABC03284 ABC03285 ABC03287 ABC03288 ABC03289
MLOC_43741.1	467	4e-62	1 - 166	93	154 / 166	None	ABC03287 ABC03289
MLOC_24520.1	459	2e-54	1 - 133	96	129 / 135	CUST_9890_PI390587928	ABC03285 ABC03286 ABC03287
MLOC_70602.1	140	4e-52	2 - 140	94	130 / 139	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_60127.1	412	4e-52	1 - 139	94	130 / 139	CUST_9888_PI390587928	ABC03287