barSeed - Barley Seed Development Database

Probe ABC03286

Source Contig ABC03286

barSeed

Links

Affymetrix Source Sequence (805 bp)

>ABC03286 805
GCACAAATATTCAACAAGCAATCCAAACTTCCAAACTCCAAAACAGCCCAACCGGAGGAG
ATCGATCGAGCTCGAGATCAGCCAGCGAGAAATGGCGGGCATGGTGTTCGGCTTGGAGGC
CCCGATGATGACAGCCCTGCAGCACCTGCTGGACACCCCGGACGGTGAGTCCGGTGCCGC
CGCCGGCGAGAAGCAGGGCCCGACGCGCGCCTACGTCCGCGACGCGCGCGCCATGGCGGC
CACCCCTGCCGACGTGAAGGAGCTGCCAGGCGCGTACGCGTTCGTGGTGGACATGCCGGG
GCTCGGGTCCGGCGACATCAAGGTGCAGGTGGAGGACGAGCGGGTGCTGGTCATCAGCGG
CGAGCGCCGGAGGGAGGAGAAGGAGGACGCCAGGTACGTGCGGATGGAGCGCCGCATGGG
CAAGATGATGCGCAAGTTCGTGCTCCCCGAGAACGCCGACATGGAGAAGATCTCCGCCGC
GTGCCGCGATGGCGTGCTCACCGTCACCGTCGAGAAGCTGCCGCCGCCCGAGCCTAAGAA
GCCCAAGACCATCCAGGTCCAGGTCGCCTGAAAATGAGATGCATGGTGTGCGCGTCGAAT
CGAAGCAGAGTATGAGTCGGTAGCGTGTTTGCTGTGATGAGTGGTGGAGTGTCAGTCTTT
TCGTTTCGTCTGCTAGACGAGGGTGTGCCGTGTCGGTTCGTGCGCAGGTGGTGATGGTTT
GATGTTTCGTTAATGGTAATGGGGATGTTCTCCGGTTAATTAAAAAAAAAAAAAGCGAAT
CCCTTGGCCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_32229.1	1072	0.0	126 - 914	99	782 / 789	CUST_9889_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375970	746	0.0	30 - 601	94	542 / 579	CUST_9887_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
AK375791	733	0.0	33 - 632	92	553 / 602	CUST_9890_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK355146	782	0.0	72 - 575	92	463 / 505	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_42046.1	343	4e-147	1 - 334	95	318 / 335	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_75844.1	667	4e-132	1 - 286	97	276 / 286	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_4817.1	602	2e-115	1 - 268	95	259 / 274	CUST_23819_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_651.1	201	2e-89	2 - 201	97	193 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_47287.1	198	1e-81	2 - 198	95	189 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_70602.1	140	1e-56	2 - 139	96	132 / 138	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_24520.1	459	1e-56	1 - 150	93	141 / 151	CUST_9890_PI390587928	ABC03285 ABC03286 ABC03287