barSeed - Barley Seed Development Database

Probe ABC03289

Source Contig ABC03289

barSeed

Links

Affymetrix Source Sequence (772 bp)

>ABC03289 772
ATTCCACAAAAATCAGCAAACAATCCAACGCAGTCCAATCGGAGGAGATCCATCGATCAG
CAAGCGAGGATGGAGGGCAGGATGTTTGGGCTGGAGACCCCGCTGATGACGGCGCTGCAG
CACCTGCTGGACATCCCGGACGGCGAGGCCGGCGGACCTGGCCACGCCGGCGGCGAGAAG
CAGGGCCCGACCCGCGCCTACGTCCGCGACGCGCGCGCCATGGCGGCCACCCCCGCCGAC
GTGAAGGAGCTGCCGGGCGCGTACTTGTTCGTGGTGGACATGCCGGGGCTCGGGTCCGGC
GACATCAAGGTGCAGGTGGAGGACGAGCGGGTGCTGGTCATCAGCGGCGAGCGCAGGAGG
GAGGAGAAGGAGGACGCCAGGTACCTGCGGATGGAGCGCCGCATGGGCAAGCTGATGCGC
AAGTTCGTGGTCCCCGACAACGCCGACACGGAGAAGATCTCCGCCGTTTGCCGCGACGGC
GTGCTCACCGTCACCGTCGACAAGCTGCCGCCGCCCGAGCCCAAGAAGCCCAAGACCATC
CAGGTCCAGGTCGCCTGAGAGATGGATTGGACGACCGAACCAGAGAGAGGTCCTTTGCCT
GCACGCCGGATCGAAGCTGAGTGGGTAGTGATCGTCTGATCGATGATTAGGGAGTGAGTT
TCCTGAGATGCGTGATGTGTGTGTGTTTTCTATCTCTGCTCGTATGGTGTCCGAGTGTTG
TGTGACTAGTTTTCGCTTTTAGTGCAATTTCAATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355146	782	0.0	18 - 773	100	756 / 756	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_75844.1	667	0.0	1 - 484	99	483 / 484	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375791	733	0.0	10 - 584	91	526 / 576	CUST_9890_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375970	746	0.0	7 - 565	90	511 / 568	CUST_9887_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_32229.1	1072	0.0	345 - 840	92	464 / 505	CUST_9889_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_42046.1	343	2e-134	1 - 323	93	302 / 323	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_43741.1	467	8e-109	1 - 217	99	216 / 217	None	ABC03287 ABC03289
MLOC_4817.1	602	4e-97	1 - 232	94	219 / 232	CUST_23819_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_78762.1	425	2e-90	124 - 425	87	263 / 302	None	ABC03284 ABC03285 ABC03287 ABC03288 ABC03289
MLOC_651.1	201	5e-86	2 - 201	96	191 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_47287.1	198	6e-75	2 - 198	93	185 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_70602.1	140	8e-54	2 - 140	94	131 / 139	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289