barSeed - Barley Seed Development Database

Probe ABC03285

Source Contig ABC03285

barSeed

Links

Affymetrix Source Sequence (737 bp)

>ABC03285 737
CAAGATTCAAGAAACAATCCAACGCAGTCCAACCCGAGGAGATCGATCGAGCTCGAGATC
AGCCGGCAAGAATGGCGGGCATGGTGTTCGGCTTGGAGAACCCGATGATGACGGCGCTGC
AGCACCTGCTGGACTTCCCGGATGGCGAGGCCGGCGGACCAGGCAACACCGGCGGCGAGA
AGCAGGGTCCGACACGCACCTACGTCCGCGACGCGCGCGCCATGGCGGCCACACCGGCCG
ACGTGAAGGAGCTGCCGGGCGCGTACGCGTTCGTGGTGGACATGCCGGGGCTCGGGTCCG
GCGACATCAAGGTGCAGGTGGAGGACGAGCGGGTGCTCGTCATCAGCGGCGAGCGGGGGA
GGGAGGAGAAGGAGGACGCCAGGTACCTGCGGATGGAGCGTCGCATGGGCAAGATGATGC
GCAAGTTCGTGCTCCCCGACAACGCCGACATGGAGAAGATCTCCGCCGCGTGCCGCGACG
GCGTGCTCACCGTCACCGTCGAGAAGCTGCCGCCGCCCGAGCCCAAGAAGCCCAAGACCA
TCCAGGTCCAGGTCGCCTGAGAATGAGATGCGTGGTGTGCGCGTCGAGTCGAAGCAGAGT
GTCGTGTCGGTTCGTGTGCACTGGTGATGGTTTGATGTCGCGTTGATGCAAATGGGGATG
ATCTTCGGCTTCGCCTGAATAAAACATTTTCTAATGAAAAATTCAAGATGCTCGTTTCNN
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK375791	733	0.0	16 - 733	100	718 / 718	CUST_9890_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_32229.1	1072	0.0	288 - 879	92	554 / 602	CUST_9889_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
AK375970	746	0.0	13 - 599	92	553 / 602	CUST_9887_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
AK355146	782	0.0	35 - 584	92	513 / 559	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_78762.1	425	9e-153	130 - 425	99	295 / 296	None	ABC03284 ABC03285 ABC03287 ABC03288 ABC03289
MLOC_75844.1	667	2e-135	1 - 295	96	285 / 296	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_42046.1	343	2e-135	1 - 322	94	302 / 322	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_24520.1	459	2e-129	1 - 251	100	251 / 251	CUST_9890_PI390587928	ABC03285 ABC03286 ABC03287
MLOC_4817.1	602	4e-111	1 - 266	94	255 / 272	CUST_23819_PI390587928	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289 ABC32683
MLOC_651.1	201	1e-101	1 - 201	100	201 / 201	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_47287.1	198	1e-76	2 - 198	93	186 / 200	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289
MLOC_70602.1	140	4e-52	2 - 140	94	130 / 139	None	ABC03284 ABC03285 ABC03286 ABC03287 ABC03288 ABC03289