barSeed - Barley Seed Development Database

Probe ABC03169

Source Contig ABC03169

barSeed

Links

Affymetrix Source Sequence (1007 bp)

>ABC03169 1007
CTCCCCCCTCGCTCTCCTCCTCCTTCGCCGCTCCCCAGACCCAGATCGCCGACGCGACGA
GAGCAATGGCGGCGGGGTACCGGGCGGAGGACGACTACGACTACCTCTTCAAGGTCGTCC
TCATCGGCGACTCCGGCGTCGGCAAGTCCAACCTGCTCTCCCGCTTCACCCGCAACGAGT
TCAGCCTCGAGTCCAAGTCCACCATCGGGGTCGAGTTCGCCACCCGCTCCCTCCAGGTCG
ACGGCAAGGTCGTCAAGGCCCAGATTTGGGACACCGCCGGCCAGGAACGATACCGTGCTA
TCACTAGCGCATACTACCGTGGTGCTGTAGGAGCGTTGCTTGTGTATGACGTCACTCGGC
ACGCAACCTTCGAGAATGCAGAGCGCTGGCTGAAGGAGTTGAGGGACCATACGGATCCGA
ACATAGTTGTCATGCTTGTTGGCAACAAGTCTGATCTCCGCCATCTTGTGGCAGTCCCAA
CCGACGAAGGGAAGGCGTTTGCAGAGAGGGAGTCGCTCTATTTCATGGAGACCTCTGCCC
TTGAGTCGACCAATGTGGAGGACGCGTTTGCGGAGGTGTTGAAACAGATTTACCGCATCG
TGAGCAAGAGGGCGGTTGATGCGGGCGAAGACTCGGCCTCCGGCCCTGGTAAGGGTGAGA
AGATCAACATGAAGGACGATGTCTCGGCGGTGAAGAAGGGCGGGTGCTGCTCTAGCTGAG
GCGCCATGTTGTATTTTTTGTTGCTGAGCTTTTGTGATGTGGCCTTTCCAGCGACCGGGA
ATTATTAGTAGCAGTAGTAGCAAGTATTATGATTATGATGTTACTTAGAGAAGTTGAAGT
TTGTTACTGAACCGAGATGTTTGTCTAGATGGGGTGAGATCTTCCTTCATATTGTTGTAT
GGTCAGGCAATCGGCATGGAGTATTGTTTTTCAGGTCATTCCATTGCAACCATGCTTGAA
CTTCTCAACTTGATTGAAATTTGCTTCACGTTTGCAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70957.2	1101	0.0	1 - 875	99	874 / 875	None	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170
MLOC_70957.1	3469	6e-151	3022 - 3314	99	292 / 293	CUST_10529_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170
AK248771.1	1028	1e-132	177 - 820	80	519 / 648	CUST_10530_PI390587928	ABC03165 ABC03166 ABC03168 ABC03169 ABC03170
MLOC_57640.2	1071	8e-115	139 - 675	81	436 / 540	CUST_8050_PI390587928 CUST_289_PI415269222	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC10901 ABC21862 ABC36918
MLOC_57641.2	3588	8e-115	2653 - 3189	81	436 / 540	CUST_8050_PI390587928 CUST_25982_PI390587928 CUST_289_PI415269222	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC10901 ABC21862 ABC36918
AK371399	1396	1e-97	220 - 653	82	355 / 435	CUST_8049_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC21862
MLOC_76794.1	1181	6e-91	1 - 419	81	341 / 420	CUST_8049_PI390587928	ABC03165 ABC03166 ABC03167 ABC03169 ABC03170 ABC21862
MLOC_73877.1	1822	1e-82	1414 - 1631	92	202 / 219	None	ABC03165 ABC03166 ABC03168 ABC03169 ABC03170
MLOC_73877.2	1551	1e-82	1143 - 1360	92	202 / 219	None	ABC03165 ABC03166 ABC03168 ABC03169 ABC03170
MLOC_73877.3	1488	1e-82	1049 - 1266	92	202 / 219	None	ABC03165 ABC03166 ABC03168 ABC03169 ABC03170
MLOC_57641.3	2148	8e-80	1793 - 2002	92	194 / 210	CUST_25982_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC21862
MLOC_57640.1	1968	8e-80	519 - 728	92	194 / 210	CUST_8050_PI390587928 CUST_289_PI415269222	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC21862 ABC36918
AK365552	1176	1e-78	220 - 606	81	315 / 390	CUST_8047_PI390587928 CUST_24983_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
AK372857	987	4e-78	171 - 539	81	302 / 372	None	ABC03165 ABC03166 ABC03167 ABC03169 ABC03170 ABC21862
AK370127	1111	2e-75	173 - 605	79	345 / 438	CUST_24983_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862