barSeed - Barley Seed Development Database

Probe ABC09907

Source Contig ABC09907

barSeed

Links

Affymetrix Source Sequence (1038 bp)

>ABC09907 1038
GACACCGGTCAGGCAACCACCTCCTCCCTACTTTTCTCCTCCTTTTCTTCATTCTCCACC
CTTCATTTCTCCTTCGTCGTTCTTTCCTCCTCCCCATCAAGAAGGGGATCTCCGCTTGCT
TGATTTTCATTTGGGAAGAGGGAAGTTATTTTTTGGTCTCAGAGTTGAAAGCGAGGAGAA
GGAATGGGCGGACGTGTGGATCACGAGTACTCCTACCTGTTCAAGATGGTGCTCATCGGG
GATAGCGGCGTCGGCAAGTCCAACATCCTCTCCCGATTCACCCGCAACCACTTCTCCCTC
GACTCCAAGTCCACCATCGGCGTGGAGTTCGCCACCAAGTCCTTGCAGATGGAGGGAAAA
ACAATAAAGGCTCAGATCTGGGACACAGCTGGTCAGGAGAGGTATCGTGCAATTACAAGC
GCATATTACCGGGGCGCTGTAGGGGCTCTCCTTGTATATGACATCACAAAGAAGCAGAGC
TTTGACAATGTTAATAGGTGGCTGCATGAGCTCCGTGATCACGCTGACTCCAGCATTGTC
ATCATGATGGTCGGTAACAAGTCCGACCTGACACATCTAAGGGCTGTCTCTGAGGATCAA
GGCAAGGCACTGGCAGAAAAGGAGGGCCTGTTTTTCCTTGAGACATCAGCTATGGAGGCT
GTGAATGTGGTAGAAGCGTTTCAGACTATCATCACAGAGGTCTATGGTATTGTCAACAAG
AAAGCACTGGCCGCCAAAGAAGCAGCAGCAGCAGCTGTTCCATTGCCTTCCCAGGGTAAA
ACCATCAGCGTTGACAGTACTGTGGGCAATTCAAAGAGGGCATGCTGCAATACTTGAAAT
GTAGGCATCATACTGTAGAGAATCTGGAGCGGGGATATCAGCAGAGCAGCTTAGTTGAAC
TGGTGGGAAGGCATTTCTATTCTTTTTGTTTTCTGTTGAGCGAACATCCTGGAGTAGGCT
GCTGTAGGGGCAGTTTGTTCAGCATTTCTGGAAGTTAGATGTGTGTATTAGGATTGTGTT
CCATTTTCCACTATGAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_45112.1	1287	0.0	26 - 1061	99	1036 / 1037	CUST_757_PI390587928 CUST_4775_PI390587928	ABC03166 ABC03170 ABC09906 ABC09907 ABC21862
AK357508	2178	2e-180	39 - 384	99	346 / 347	CUST_757_PI390587928	ABC09906 ABC09907
AK365552	1176	2e-100	229 - 718	80	395 / 492	CUST_24983_PI390587928 CUST_8047_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
AK370127	1111	8e-100	168 - 672	80	404 / 506	CUST_24983_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
MLOC_63864.1	1215	1e-63	557 - 923	79	291 / 369	None	ABC03165 ABC03166 ABC03167 ABC03170 ABC09906 ABC09907 ABC21862