barSeed - Barley Seed Development Database

Probe ABC09906

Source Contig ABC09906

barSeed

Links

Affymetrix Source Sequence (1014 bp)

>ABC09906 1014
GGGGATCTCCGCTTGCTTGATTTTCATTTGGGAAGAGGGAAGTTATTTTTTGGTCTCAGA
GTTGAAAGCGAGGAGAAGGAATGGGCGGACGTGTGGATCACGAGTACTCCTACCTGTTCA
AGATGGTGCTCATCGGGGATAGCGGCGTCGGCAAGTCCAACATCCTCTCCCGATTCACCC
GCAACCACTTCTCCCTCGACTCCAAGTCCACCATCGGCGTGGAGTTCGCCACCAAGTCCT
TGCAGATGGAGGGAAAAACAATAAAGGCTCAGATCTGGGACACAGCTGGTCAGGAGAGGT
ATCGTGCAATTACAAGCGCATATTACCGGGGCGCTGTAGGGGCTCTCCTTGTATATGACA
TCACAAAGAAGCAGAGCTTTGACAATGTTAATAGGTGGCTGCATGAGCTCCGTGATCACG
CTGACTCCAGCATTGTCATCATGATGGTCGGTAACAAGTCCGACCTGACACATCAGCTAT
GGAGGCTGTGAATGTGGTAGAAGCGTTTCAGACTATCATCACAGAGGTCTATGGTATTGT
CAACAAGAAAGCACTGGCCGCCAAAGAAGCAGCAGCAGCAGCTGTTCCATTGCCTTCCCA
GGGTAAAACCATCAGCGTTGACAGTACTGTGGGCAATTCAAAGAGGGCATGCTGCAATAC
TTGAAATGTAGGCATCATACTGTAGAGAATCTGGAGCGGGGATATCAGCAGAGCAGCTTA
GTTGAACTGGTGGGAAGGCATTTCTATTCTTTTTGTTTTCTGTTGAGCGAACATCCTGGA
GTAGGCTGCTGTAGGGGCAGTTTGTTCAGCATTTCTGGAAGTTAGATGTGTGTATTAGGA
TTGTGTTCCATTTTCCACTATGAAAGTTACATGATACTACAATATATGTCGGATTATACA
TCATATTTGATAGGACCCAAAACAAGTTTTGTTAAACCCGTTGTAGTATATATTTGCTGC
TTCTTGGTTTGCTAACTAGTTATGCTACTTTTGTTCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_45112.1	1287	0.0	127 - 600	100	474 / 474	CUST_4775_PI390587928 CUST_757_PI390587928	ABC03166 ABC03170 ABC09906 ABC09907 ABC21862
AK357508	2178	1e-118	1456 - 1687	100	232 / 232	CUST_757_PI390587928	ABC09906 ABC09907
AK365552	1176	1e-93	229 - 614	83	320 / 386	CUST_8047_PI390587928 CUST_24983_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
AK370127	1111	3e-84	168 - 545	82	309 / 378	CUST_24983_PI390587928	ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
MLOC_63864.1	1215	1e-63	557 - 923	79	291 / 369	None	ABC03165 ABC03166 ABC03167 ABC03170 ABC09906 ABC09907 ABC21862