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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24983_PI390587928Hv_44K_v2AACACATGGCGCACCGGGTGGACAACGAGTACGACTACCTCTTCAAGATCGTGCTCATCG386GeneList: tan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5600.6101.6302.5691.1061.109
Raw 146.025239.018579.3001457.303226.535240.796



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37012711112e-24161 - 22010060 / 60plus ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
MLOCAK36555211769e-22227 - 28110055 / 55plus ABC03165 ABC03166 ABC03167 ABC03168 ABC03169 ABC03170 ABC09906 ABC09907 ABC21862
MLOCMLOC_19967.14769e-22341 - 39510055 / 55plus ABC03166 ABC03170
JLOC1JLOC1_13841.14765e-22341 - 39510055 / 55plus
Harvest21ABC369734673e-25387 - 44610060 / 60plus
Harvest21ABC0317011633e-25124 - 18310060 / 60plusABC03170
Harvest21ABC0316613282e-22346 - 40010055 / 55plusABC03166
Harvest35U35_417744673e-25387 - 44610060 / 60plus
Harvest35U35_1526311633e-25124 - 18310060 / 60plus
Harvest35U35_1525913272e-22346 - 40010055 / 55plus



Contig Sequence (467 bp)

>U35_41774 467 Hv_44K_v2
TCATCAACCATTTTGGCCTTGGGTGGCTGCCCCGCTGTATACCCACCAGTACCACCACCG
CCCCCACTCCGCCTCTCGTTTCGTTTCGGTTTCCTTCCACCCTCCCTCCCCCTCCCCACC
CACCTCCCTCTCCTCTCCGGCGCGCCTCCCCCCACCGGCGAATCCGCAACCGAATCCAAT
CCCAGGTACGCGCGATTCCCCTCGCTCCCGCGGCGATCCCCCCCCGCCCGCCCCGGCCGG
ATCCCGCGGCCCGCTCCCCTTCATCCGTATCCTCGACTACCTACCCACTGATCTCCGCCT
CGGCTGGCTGGATCTCGGCCGCGCGGTTGGTGCAGGATCCGCGTGCGGCGGCGGGCGGGC
GGGCGGGCGGCGGCGGAGGAGGTAGGAACACATGGCGCACCGGGTGGACAACGAGTACGA
CTACCTCTTCAAGATCGTGCTCATCGGCGACTCCGGCGTCGGCAAGT



Homology of Contig U35_41774 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None