barSeed - Barley Seed Development Database

Probe ABC02019

Source Contig ABC02019

barSeed

Links

Affymetrix Source Sequence (1032 bp)

>ABC02019 1032
GGTTAATATCGCGGCATCGGGTCCTGCGCTACGCTGGGCGCTCGCTGCTCCCTCCCCTCC
TCCTCGCCTCCGCTGCCGTCGCGCGAGATCAACCCCGCCGCCATGGCTGGAGAAGCTGAT
GGGAAGACCTACCAGGTATCAAGGATGCCCCCTGCTGCTCTCAATGAGCGCATCCTTTCT
TCCATGTCTCAAAAGCATGTTGCTGCTCACCCATGGCACGACCTGGAGATAGGTCCAGGA
GCTCCTGCAGTTTTCAACTGTGTTGTTGAGATTCCTAGAGGCAGCAAAGTCAAGTATGAG
TTGGACAAAGCAACTGGTCTTATCAAGGTTGATCGTGTTCTTTACTCCTCAGTTGTGTAC
CCACACAACTATGGCTTCATTCCACGCACACTCTGTGAGGACAATGACCCGATGGACGTC
CTTGTCCTGATGCAGGAACAAGTTGTCCCTGGTTGCTTCCTGCGTGCCCGTGCTATTGGG
CTTATGCCTATGATTGACCAGGGTGAGAAAGATGACAAGATCATAGCTGTCTGTGCTGAT
GATCCTGAGTACCGTCACTTCAGAGACATCAGTGAACTTCCCCCGCATCGCCTACAGGAG
ATCCGTCGCTTCTTTGAAGACTACAAGAAGAATGAAAATAAGGAGGTTGCAGTGAATGAT
TTCCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGTTCG
TACATCATGGAGGGCTTAAGGAAGTGATCTCCAGCTGGTGGACTGCAGATGCTACGCGAT
CCGCCCTACGGCTTATCAATAGTACGACAGACATTTATGTTAACATGATGATCGAAAACC
ATCAGTCTGTCGGGGATATATATATGCACCTTCTGTCCATGCTGAGGCAAGCATGGGTAC
ATTTTCCTTCCGTATATGCCATGTCAGGTCCAAGTATTTGACCTCGTGCTGGAACCTTTT
TTGTCAAACCGTCTCTTAACAGAGCGTCTGCTTAATAGGAAATCAGCGTTACATCAAAAA
AAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249309.1	1024	0.0	12 - 1022	99	1011 / 1012	CUST_28192_PI390587928 CUST_18759_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.2	993	0.0	1 - 865	100	865 / 865	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.1	1129	0.0	183 - 1010	100	828 / 828	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.3	978	0.0	1 - 813	100	813 / 813	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32988.2	5522	2e-51	3157 - 3267	100	111 / 111	CUST_28192_PI390587928 CUST_15346_PI390587928 CUST_18759_PI390587928	ABC02019 ABC06879
AK356900	1096	1e-87	221 - 654	80	350 / 436	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843
AK366118	2108	1e-77	1486 - 1871	80	311 / 387	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843