barSeed - Barley Seed Development Database

Probe ABC02021

Source Contig ABC02021

barSeed

Links

Affymetrix Source Sequence (1119 bp)

>ABC02021 1119
GGTTCACCGATCGTCCCCCCGCCCCGCCAACTCCTCTTCTCCCTCCTATATATGCACGCC
GGGCCACGGACGTTTCGGCCATCCCGTCCTCACAGCCGCGCAACGATCCCGCTCACAGCA
AATCAGCCTCGTCGTTTTTGGTCGGATCGAGGATGAGCCAGGACAGCGGAGCCAAAGGGC
AGGCCGCCGGCGACAAGGAGGCGGCGGAGCCAAAGAGGCAGACGCCCCGGCTCAACGAGC
GGATCCTCTCCTCCCTCTCCCGGAGGTCCGTCGCCGCCCACCCGTGGCACGACCTCGAGA
TCGGCCCCGGAGCTCCGGCGGTGTTCAACGTGGTGGTGGAGATCACCAAGGGCAGCAAGG
TCAAGTACGAGCTCGACAAGAAGACCGGAATGATCAAGGTTGACCGGATCCTCTACTCCT
CCGTGGTGTACCCTCACAACTACGGCTTCGTCCCACGCACCCTCTGCGAGGACAACGACC
CCATCGATGTCCTCGTCCTCATGCAGGAACCAGTCCTCCCCGGCACCTTCCTCCGGGCCA
GGGCCATCGGCCTCATGCCTATGATCGATCAGGGAGAGAAGGATGACAAGATCATAGCCG
TCTGCGCAGACGACCCCGAGTACCACAACCTGAACCATCTCAGCGAGCTCTCTCCTCATC
GCCTGCAGGAGATCCGCCGCTTCTTCGAAGACTACAAGAAGAATGAGAACAAGGAGGTGG
CTGTCAACGACTTCCTCCCCGCGGACGACGCTCGTGCTGCCATCCAGCACTCCATGGATC
TGTACGCCGAGTACATTATGCACAGCCTAAGGCGGTAGAGCGTGTACAATTACCTTATAT
TTTTTTCCTTTGCCCTTCCTCCTATGGTGGGAAGCAAAGAAGATCCCCTCGAAGCATTTG
GGATCTGATAAACACCCACTTTACGCGAGTTTGTATTTCCACATTCTCGCATTAGTTTGT
ATTGGCCATATTTTTCGGCCACTGTGGTACTATATTGTATCTCAAATTTGTATTCAAGAC
CTTGTGGTTTGGCTCGTGTATTATCTTCAGTTCTTACTGAACAAATAATAATATCAAAAT
TTCTCACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_77595.1	1246	0.0	1 - 1064	99	1060 / 1064	None	ABC02018 ABC02021
MLOC_77595.2	772	0.0	19 - 590	99	569 / 572	None	ABC02021
AK356900	1096	5e-92	166 - 754	77	455 / 590	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843
AK366118	2108	1e-68	1485 - 1971	76	373 / 488	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843