barSeed - Barley Seed Development Database

Probe ABC02020

Source Contig ABC02020

barSeed

Links

Affymetrix Source Sequence (578 bp)

>ABC02020 578
ATGCGTTCTTACCTGCGACCACTGCCCGCGAGGCCATTCAGTATTCGATGTAAGTACAGT
TTTGTGTTGATCTCTGTGTAGATGTATTTTTTCTGTTCGTTGCATAAGTGATGAAGGTGA
AAGTGTATTTTGGTTTACGATGACGCTTCTTTTCCTTTTTCATCGCAGGGACCTGTATGC
GCAGTATATTCTGCAAAGCTTAAGGCAGTAGCATGTTGGTGGTTGTATCGCGGAAATCTT
GTATTAATAACAAGTGGGGAATAGCCGAGACTATGTGTGTTATAAATAAATGCGCAACAA
TGTGTACTCACACTATTTATGAAGATTAAGTGATGCTTTATGATTGGGAATGTTTTAGCA
AATTTTTGTTGTGCCGAATTCATATATCCATTTTGAATCCTGGCTGCAGCAGCCTGTGTT
TAGATAGGCCTGTTTGGTTGCTGTCCTGGCCAACTCGACTGGGCCACGCTTCTTTCCCTT
TCTCTGTTTCTGGTTTGGAGAAAGCATTGTATTTTCGTCATGATATATAATGAAAAGGGG
AGCAGCCCGGTTCAAAAAACCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356900	1096	0.0	712 - 1096	99	383 / 385	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843
MLOC_37823.1	400	4e-96	1 - 197	99	195 / 197	None	ABC02018 ABC02020 ABC32547 ABC33843
AK366118	2108	2e-88	1929 - 2108	99	179 / 180	CUST_18760_PI390587928	ABC02018 ABC02019 ABC02020 ABC02021 ABC32547 ABC33843