barSeed - Barley Seed Development Database

Probe ABC02022

Source Contig ABC02022

barSeed

Links

Affymetrix Source Sequence (805 bp)

>ABC02022 805
GGGTCATTGTCCTCACAGAGTGTGCGTGGAATGAAGCCATAGTTGTGTGGGTACACAACT
GAGGAGTAAAGAACACGATCAACCTTGATAAGACCAGTTGCTTTGTCCAACTCATACTTG
ACTTTGCTGCCTCTAGCAATGGCAGCATCCACAGCGCAGAAATCCGCAGCCATGGCTTCC
CAGCTCTCCGCCATGACCTCCGTGCCGCAGTTCCACGGCCTCAGGACCTACTCCTCGCCC
AGGTCCATGGCGACGCTGCCGTCCTTGAGGAGGAGGAGGTCCCAGGGCATCCGCTGCGAC
TACATCGGCTCCTCCACCAACCTCATCATGGTGACGACGACGACCCTGATGCTCTTCGCC
GGGCGGTTCGGGCTGGCGCCGTCGGCGAACAGGAAGGCGACGGCGGGGCTCAAGCTGGAG
GCGCGCGAGTCCGGGCTGCAGACGGGCGACCCGGCCGGTTTCACGCTCGCCGACACGCTC
GCATGCGGCGCCGTTGGCCACATCATGGGCGTCGGCATCGTGCTCGGCCTCAAGAACACC
GGCGTCCTCGACCAGATCATCGGCTAGAATAACCCTTCCTTTTCCCTCCATAGCTGTTCT
GCATCCATCGGGCGCTCCATCTAGTGGATCAACTAATGCTCCCTTCGTAATTTGATCATG
TGAATGTATGTGTATGCATCTTTGTTTCAGAGGGAAAATACCGCCGCGCCGGTGTGGCAA
CTGCTTCAAAAAAAAAAAAAAAAATTCACCATCTATAGTAGACTATTACTCCCTCTGTAA
ATTAACATAAAAACATTTAAATCAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_6738.1	796	0.0	263 - 796	99	533 / 534	None	ABC02022
AK249309.1	1024	5e-66	281 - 420	99	139 / 140	CUST_18759_PI390587928 CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.1	1129	5e-66	701 - 840	99	139 / 140	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.2	993	5e-66	556 - 695	99	139 / 140	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022
MLOC_32990.3	978	5e-66	504 - 643	99	139 / 140	CUST_28192_PI390587928	ABC02018 ABC02019 ABC02022