Probe CUST_5339_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5339_PI426222305 | JHI_St_60k_v1 | DMT400003883 | GGCTCTTTGGTCACCTTTAAAGCTATTAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
All Microarray Probes Designed to Gene DMG401001531
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5133_PI426222305 | JHI_St_60k_v1 | DMT400003882 | TATAATGGCTCTTTGGTCACCTTTAAAGCTATTGTGAGTTTCGAAAATTGCTTCTCCGAT |
| CUST_5339_PI426222305 | JHI_St_60k_v1 | DMT400003883 | GGCTCTTTGGTCACCTTTAAAGCTATTAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5198_PI426222305 | JHI_St_60k_v1 | DMT400003886 | GCTCTTACTATTCAAGTTAGTGTAGTGTTAATTAAGCGTGATCAGGAGATTAATGGTTTG |
| CUST_5014_PI426222305 | JHI_St_60k_v1 | DMT400003884 | TATCTATGGTGGAGATTGAATTTGAAGAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5086_PI426222305 | JHI_St_60k_v1 | DMT400003887 | GCTCCTTGTAGGAACAAGTCTTCGAGTGATATGAGATCATGTCATGAATCATCTTTTATT |
Microarray Signals from CUST_5339_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 61.9128 | 16.0902 | 0.947245 | 0.255751 |
| ABA 1h | 45.4624 | 7.1633 | 0.823357 | 0.0915688 |
| ACC 1h | 83.4737 | 32.0378 | 1.0237 | 0.649111 |
| BABA 1h | 83.6243 | 24.0392 | 1.27769 | 0.340149 |
| Chitin 1h | 76.0533 | 16.5692 | 1.3137 | 0.36082 |
| Epi 1h | 60.3548 | 5.25645 | 1.13974 | 0.133124 |
| SA 1h | 149.7 | 28.6326 | 2.32151 | 0.306652 |
| Me-JA 1h | 65.3024 | 15.8769 | 1.24878 | 0.192276 |
| Control 6h | 34.4014 | 9.25236 | 0.520372 | 0.118043 |
| ABA 6h | 134.903 | 45.3049 | 1.80935 | 0.697571 |
| ACC 6h | 246.12 | 157.165 | 2.31603 | 2.2686 |
| BABA 6h | 159.184 | 37.0928 | 2.22992 | 0.430321 |
| Chitin 6h | 37.7094 | 7.11715 | 0.563831 | 0.0947431 |
| Epi 6h | 24.8272 | 5.40861 | 0.343795 | 0.0568663 |
| SA 6h | 27.6381 | 13.215 | 0.326715 | 0.220483 |
| Me-JA 6h | 46.2164 | 11.2226 | 0.708818 | 0.16176 |
Source Transcript PGSC0003DMT400003883 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G38320.1 | +2 | 2e-152 | 447 | 203/340 (60%) | TRICHOME BIREFRINGENCE-LIKE 34 | chr2:16055488-16057874 FORWARD LENGTH=410 |