Probe CUST_5198_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5198_PI426222305 | JHI_St_60k_v1 | DMT400003886 | GCTCTTACTATTCAAGTTAGTGTAGTGTTAATTAAGCGTGATCAGGAGATTAATGGTTTG |
All Microarray Probes Designed to Gene DMG401001531
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5133_PI426222305 | JHI_St_60k_v1 | DMT400003882 | TATAATGGCTCTTTGGTCACCTTTAAAGCTATTGTGAGTTTCGAAAATTGCTTCTCCGAT |
| CUST_5339_PI426222305 | JHI_St_60k_v1 | DMT400003883 | GGCTCTTTGGTCACCTTTAAAGCTATTAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5198_PI426222305 | JHI_St_60k_v1 | DMT400003886 | GCTCTTACTATTCAAGTTAGTGTAGTGTTAATTAAGCGTGATCAGGAGATTAATGGTTTG |
| CUST_5014_PI426222305 | JHI_St_60k_v1 | DMT400003884 | TATCTATGGTGGAGATTGAATTTGAAGAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5086_PI426222305 | JHI_St_60k_v1 | DMT400003887 | GCTCCTTGTAGGAACAAGTCTTCGAGTGATATGAGATCATGTCATGAATCATCTTTTATT |
Microarray Signals from CUST_5198_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.33712 | 3.09796 | 0.835727 | 0.483289 |
| ABA 1h | 6.43594 | 3.03215 | 1.10397 | 0.554603 |
| ACC 1h | 7.09093 | 3.4149 | 1.05234 | 0.534514 |
| BABA 1h | 7.88205 | 3.2995 | 1.19617 | 0.575549 |
| Chitin 1h | 8.65566 | 3.20287 | 1.4262 | 0.582627 |
| Epi 1h | 7.92163 | 3.10555 | 1.32047 | 0.623389 |
| SA 1h | 9.94964 | 3.14568 | 1.4246 | 0.536137 |
| Me-JA 1h | 7.36817 | 3.23878 | 1.30081 | 0.643153 |
| Control 6h | 5.74178 | 3.32904 | 0.895485 | 0.518849 |
| ABA 6h | 13.0718 | 3.53775 | 1.78229 | 0.560491 |
| ACC 6h | 10.4346 | 3.99732 | 1.27726 | 0.596947 |
| BABA 6h | 11.4881 | 4.48066 | 1.39152 | 0.582034 |
| Chitin 6h | 6.23763 | 3.6137 | 0.916123 | 0.530464 |
| Epi 6h | 7.47113 | 3.77695 | 1.01429 | 0.523615 |
| SA 6h | 5.95592 | 3.4545 | 0.941732 | 0.546176 |
| Me-JA 6h | 5.71764 | 3.31459 | 0.897131 | 0.519492 |
Source Transcript PGSC0003DMT400003886 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G38320.1 | +3 | 3e-49 | 166 | 74/119 (62%) | TRICHOME BIREFRINGENCE-LIKE 34 | chr2:16055488-16057874 FORWARD LENGTH=410 |