Probe CUST_5014_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5014_PI426222305 | JHI_St_60k_v1 | DMT400003884 | TATCTATGGTGGAGATTGAATTTGAAGAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
All Microarray Probes Designed to Gene DMG401001531
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5133_PI426222305 | JHI_St_60k_v1 | DMT400003882 | TATAATGGCTCTTTGGTCACCTTTAAAGCTATTGTGAGTTTCGAAAATTGCTTCTCCGAT |
| CUST_5339_PI426222305 | JHI_St_60k_v1 | DMT400003883 | GGCTCTTTGGTCACCTTTAAAGCTATTAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5198_PI426222305 | JHI_St_60k_v1 | DMT400003886 | GCTCTTACTATTCAAGTTAGTGTAGTGTTAATTAAGCGTGATCAGGAGATTAATGGTTTG |
| CUST_5014_PI426222305 | JHI_St_60k_v1 | DMT400003884 | TATCTATGGTGGAGATTGAATTTGAAGAGAAAAAGCACCTGTTCCAAATAAGTCCCAAAT |
| CUST_5086_PI426222305 | JHI_St_60k_v1 | DMT400003887 | GCTCCTTGTAGGAACAAGTCTTCGAGTGATATGAGATCATGTCATGAATCATCTTTTATT |
Microarray Signals from CUST_5014_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.31995 | 3.06613 | 0.948388 | 0.546476 |
| ABA 1h | 5.64515 | 2.96852 | 1.14622 | 0.600271 |
| ACC 1h | 5.73393 | 3.32479 | 0.994725 | 0.576019 |
| BABA 1h | 7.19751 | 3.25789 | 1.27369 | 0.630856 |
| Chitin 1h | 5.32688 | 3.09967 | 1.0734 | 0.610957 |
| Epi 1h | 6.98587 | 3.10428 | 1.3802 | 0.675253 |
| SA 1h | 5.29966 | 3.0695 | 0.920186 | 0.532865 |
| Me-JA 1h | 5.41448 | 3.14152 | 1.18077 | 0.683679 |
| Control 6h | 5.58845 | 3.18642 | 0.994549 | 0.567244 |
| ABA 6h | 5.69527 | 3.30512 | 0.954579 | 0.553359 |
| ACC 6h | 6.5341 | 3.88687 | 0.990461 | 0.573547 |
| BABA 6h | 6.13627 | 3.56125 | 0.976047 | 0.565363 |
| Chitin 6h | 6.02256 | 3.48827 | 1.009 | 0.584234 |
| Epi 6h | 6.28098 | 3.66842 | 0.986405 | 0.57175 |
| SA 6h | 5.75571 | 3.3366 | 1.03742 | 0.601029 |
| Me-JA 6h | 5.46334 | 3.16927 | 0.977996 | 0.566896 |
Source Transcript PGSC0003DMT400003884 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G38320.1 | +2 | 3e-74 | 192 | 84/159 (53%) | TRICHOME BIREFRINGENCE-LIKE 34 | chr2:16055488-16057874 FORWARD LENGTH=410 |