Probe CUST_2359_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
All Microarray Probes Designed to Gene DMG400010467
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
Microarray Signals from CUST_2359_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 16.0759 | 3.68021 | 0.814183 | 0.20216 |
| ABA 1h | 16.8384 | 4.87779 | 0.906253 | 0.249166 |
| ACC 1h | 17.6267 | 8.22553 | 0.71094 | 0.413272 |
| BABA 1h | 19.0604 | 3.88408 | 1.01709 | 0.219815 |
| Chitin 1h | 6.32857 | 3.50554 | 0.36726 | 0.20343 |
| Epi 1h | 10.7737 | 3.65944 | 0.599376 | 0.246628 |
| SA 1h | 20.3861 | 3.76453 | 1.01842 | 0.193933 |
| Me-JA 1h | 14.4289 | 4.45016 | 0.811704 | 0.288427 |
| Control 6h | 32.165 | 8.33366 | 1.56042 | 0.297521 |
| ABA 6h | 43.6342 | 8.30029 | 2.05952 | 0.372681 |
| ACC 6h | 29.3402 | 6.18862 | 1.28161 | 0.216317 |
| BABA 6h | 38.2397 | 11.029 | 1.63082 | 0.46574 |
| Chitin 6h | 33.9705 | 9.05725 | 1.51666 | 0.551176 |
| Epi 6h | 35.7187 | 11.3405 | 1.51322 | 0.485245 |
| SA 6h | 12.7858 | 4.03534 | 0.653253 | 0.225442 |
| Me-JA 6h | 31.1563 | 9.11662 | 1.47927 | 0.381969 |
Source Transcript PGSC0003DMT400027132 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084270.1 | +1 | 0.0 | 551 | 312/322 (97%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63212066-63219689 transcript_region:SL2.50ch10:63212066..63219689+ go_terms:GO:0005488 functional_description:Importin alpha-2 subunit (AHRD V1 ***- B6SUZ9_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical |
| TAIR PP10 | AT5G03070.1 | +1 | 2e-139 | 413 | 230/322 (71%) | importin alpha isoform 9 | chr5:718468-721395 REVERSE LENGTH=519 |