Probe CUST_2324_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
All Microarray Probes Designed to Gene DMG400010467
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
Microarray Signals from CUST_2324_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 9.38864 | 3.2472 | 1.27764 | 0.458987 |
| ABA 1h | 9.99719 | 4.27769 | 1.3205 | 0.707511 |
| ACC 1h | 6.76195 | 3.4777 | 0.895194 | 0.472396 |
| BABA 1h | 9.6705 | 3.43118 | 1.30857 | 0.529112 |
| Chitin 1h | 5.51856 | 3.20654 | 0.850248 | 0.488904 |
| Epi 1h | 6.964 | 3.21147 | 1.08541 | 0.516486 |
| SA 1h | 7.85443 | 3.20478 | 1.02893 | 0.445713 |
| Me-JA 1h | 6.6165 | 3.28371 | 1.09663 | 0.564043 |
| Control 6h | 5.7171 | 3.31583 | 0.787159 | 0.45649 |
| ABA 6h | 11.062 | 3.47494 | 1.4245 | 0.455523 |
| ACC 6h | 6.77468 | 4.03269 | 0.794588 | 0.460683 |
| BABA 6h | 14.0578 | 5.31826 | 1.48159 | 0.627636 |
| Chitin 6h | 12.0737 | 3.7009 | 1.48455 | 0.51647 |
| Epi 6h | 10.5137 | 3.83029 | 1.19545 | 0.508287 |
| SA 6h | 5.93915 | 3.4395 | 0.828388 | 0.479664 |
| Me-JA 6h | 6.27454 | 3.26362 | 0.866324 | 0.453615 |
Source Transcript PGSC0003DMT400027138 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084270.1 | +1 | 4e-28 | 111 | 52/53 (98%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63212066-63219689 transcript_region:SL2.50ch10:63212066..63219689+ go_terms:GO:0005488 functional_description:Importin alpha-2 subunit (AHRD V1 ***- B6SUZ9_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical |
| TAIR PP10 | AT5G03070.1 | +1 | 1e-23 | 99 | 45/52 (87%) | importin alpha isoform 9 | chr5:718468-721395 REVERSE LENGTH=519 |