Probe CUST_2121_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
All Microarray Probes Designed to Gene DMG400010467
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
Microarray Signals from CUST_2121_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 13.7637 | 4.5672 | 1.45472 | 0.586809 |
| ABA 1h | 7.63656 | 3.16116 | 1.01836 | 0.448264 |
| ACC 1h | 13.9604 | 3.63363 | 1.54618 | 0.472516 |
| BABA 1h | 9.44915 | 3.48104 | 1.06942 | 0.485468 |
| Chitin 1h | 11.2113 | 3.34953 | 1.49134 | 0.461916 |
| Epi 1h | 7.10484 | 3.28625 | 0.962072 | 0.465344 |
| SA 1h | 6.85278 | 3.2646 | 0.795943 | 0.387633 |
| Me-JA 1h | 5.74754 | 3.33472 | 0.848577 | 0.491401 |
| Control 6h | 15.0955 | 4.82527 | 1.59069 | 0.526479 |
| ABA 6h | 21.3717 | 7.32172 | 2.07357 | 0.86433 |
| ACC 6h | 6.92927 | 4.13753 | 0.709368 | 0.411649 |
| BABA 6h | 12.3714 | 4.59295 | 1.17605 | 0.475446 |
| Chitin 6h | 20.2302 | 3.86624 | 2.22689 | 0.455287 |
| Epi 6h | 18.845 | 12.0913 | 1.33325 | 1.10597 |
| SA 6h | 6.04258 | 3.50559 | 0.737262 | 0.427482 |
| Me-JA 6h | 12.9338 | 3.73692 | 1.39355 | 0.491452 |
Source Transcript PGSC0003DMT400027137 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084270.1 | +3 | 2e-132 | 394 | 199/204 (98%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63212066-63219689 transcript_region:SL2.50ch10:63212066..63219689+ go_terms:GO:0005488 functional_description:Importin alpha-2 subunit (AHRD V1 ***- B6SUZ9_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical |
| TAIR PP10 | AT5G03070.1 | +3 | 2e-92 | 290 | 142/203 (70%) | importin alpha isoform 9 | chr5:718468-721395 REVERSE LENGTH=519 |