Probe CUST_2239_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
All Microarray Probes Designed to Gene DMG400010467
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
Microarray Signals from CUST_2239_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 18.8805 | 3.66395 | 0.849205 | 0.169194 |
| ABA 1h | 18.0348 | 4.09304 | 0.877306 | 0.250279 |
| ACC 1h | 20.9475 | 7.27154 | 0.774512 | 0.330112 |
| BABA 1h | 19.9746 | 7.62512 | 0.769156 | 0.328753 |
| Chitin 1h | 11.6005 | 3.71856 | 0.558003 | 0.203939 |
| Epi 1h | 11.0511 | 3.54719 | 0.527916 | 0.212746 |
| SA 1h | 24.2023 | 7.33505 | 0.980327 | 0.254497 |
| Me-JA 1h | 13.9616 | 3.79898 | 0.767177 | 0.219337 |
| Control 6h | 30.6127 | 12.5423 | 1.12868 | 0.484866 |
| ABA 6h | 44.8686 | 12.9442 | 1.71001 | 0.591556 |
| ACC 6h | 33.7742 | 6.20878 | 1.28774 | 0.192348 |
| BABA 6h | 30.2863 | 8.7627 | 1.095 | 0.381222 |
| Chitin 6h | 31.1868 | 9.88442 | 1.19289 | 0.483338 |
| Epi 6h | 34.6155 | 10.9077 | 1.24258 | 0.550047 |
| SA 6h | 22.0108 | 7.58148 | 0.833636 | 0.604558 |
| Me-JA 6h | 33.8923 | 7.07493 | 1.47955 | 0.203911 |
Source Transcript PGSC0003DMT400027134 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084270.1 | +1 | 0.0 | 938 | 509/521 (98%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63212066-63219689 transcript_region:SL2.50ch10:63212066..63219689+ go_terms:GO:0005488 functional_description:Importin alpha-2 subunit (AHRD V1 ***- B6SUZ9_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical |
| TAIR PP10 | AT5G03070.1 | +1 | 0.0 | 697 | 370/520 (71%) | importin alpha isoform 9 | chr5:718468-721395 REVERSE LENGTH=519 |