Probe CUST_2156_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
All Microarray Probes Designed to Gene DMG400010467
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2324_PI426222305 | JHI_St_60k_v1 | DMT400027138 | ATGATAGTTATCCTAACTGCATAGTCAAAGCCCATTGTCTCTTGTAACTTCTGTTTTTAC |
| CUST_2156_PI426222305 | JHI_St_60k_v1 | DMT400027135 | TGAATAAACTACTTTACCTCCCCCAGAAGAGTTCCTTACATGTCGTGGAGCAGTGTGCAT |
| CUST_2121_PI426222305 | JHI_St_60k_v1 | DMT400027137 | CATTAATGTTGAGTCTTTGACAACTATGGTTTAATCAGGTGCTGCGGAGCTTGGGAAATC |
| CUST_2359_PI426222305 | JHI_St_60k_v1 | DMT400027132 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
| CUST_2239_PI426222305 | JHI_St_60k_v1 | DMT400027134 | TCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAG |
Microarray Signals from CUST_2156_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 47.1504 | 7.00018 | 0.975837 | 0.109198 |
| ABA 1h | 39.6818 | 5.04493 | 0.935706 | 0.0982124 |
| ACC 1h | 41.9489 | 12.2583 | 0.769905 | 0.241687 |
| BABA 1h | 44.4187 | 8.18448 | 0.942317 | 0.10105 |
| Chitin 1h | 39.3677 | 4.20302 | 0.918015 | 0.108318 |
| Epi 1h | 33.2428 | 3.86863 | 0.809885 | 0.0943865 |
| SA 1h | 47.161 | 14.2761 | 0.895874 | 0.223516 |
| Me-JA 1h | 33.0394 | 4.02607 | 0.852789 | 0.103593 |
| Control 6h | 79.351 | 22.0181 | 1.51469 | 0.402016 |
| ABA 6h | 81.6265 | 19.3205 | 1.51766 | 0.369402 |
| ACC 6h | 61.9772 | 14.0715 | 1.0905 | 0.103551 |
| BABA 6h | 69.5361 | 17.2918 | 1.22823 | 0.300293 |
| Chitin 6h | 82.7808 | 17.967 | 1.55732 | 0.408859 |
| Epi 6h | 77.0861 | 11.8703 | 1.41719 | 0.281275 |
| SA 6h | 55.5 | 9.64952 | 1.15266 | 0.354756 |
| Me-JA 6h | 74.4495 | 17.131 | 1.4877 | 0.279181 |
Source Transcript PGSC0003DMT400027135 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084270.1 | +1 | 4e-156 | 458 | 260/267 (97%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63212066-63219689 transcript_region:SL2.50ch10:63212066..63219689+ go_terms:GO:0005488 functional_description:Importin alpha-2 subunit (AHRD V1 ***- B6SUZ9_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical |
| TAIR PP10 | AT5G03070.1 | +1 | 4e-115 | 353 | 200/266 (75%) | importin alpha isoform 9 | chr5:718468-721395 REVERSE LENGTH=519 |