barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_42255_PI390587928Hv_44K_v2AAGGACATTGGGTATAAGCTGAGAGTTCTCACACAAAATTACCCGGATACACCAGGTTGC263GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36422129392e-242676 - 273510060 / 60plus ABC08511 ABC09582 ABC12319 ABC15629 ABC24189 ABC26165 ABC40107 ABC40364 ABC40947
MLOCAK36558630552e-242835 - 289410060 / 60plus ABC08511 ABC09582 ABC12319 ABC15629 ABC24189 ABC26165 ABC40107 ABC40364 ABC40947
MLOCMLOC_24868.16487e-2319 - 7510057 / 57plus None
Harvest21ABC507664873e-25264 - 32310060 / 60minus
Harvest21ABC282326643e-25585 - 64410060 / 60plus
Harvest35U35_487314873e-25264 - 32310060 / 60minus
Harvest35U35_396497533e-25232 - 29110060 / 60minus
Harvest35U35_290716643e-25585 - 64410060 / 60plus



Contig Sequence (487 bp)

>U35_48731 487 Hv_44K_v2
ATAGTTTTACTGATNCACAACACATAACATATATGCAAAGTTGCATAACAAATTTCATGA
TCCATACATCCAAAATTCCATAGCATCCATACATCCAAAATTCCATAGCATCCATATATA
CATATAGTTCCATAGCATCCATACATACATAGCTCCATAGCAAATATAATACACAACGAT
ACTTTACGGGCATTAGTAAGTAATATTTGGCACTAAAACAAATGGCTTCATGTCCATATC
GTAGTCCAAAGAGCATCCGCGTGGCAACCTGGTGTATCCGGGTAATTTTGTGTGAGAACT
CTCAGCTTATACCCAATGTCCTTCTCTAGGTCTTCTATCTCTTGACGTATACGATTTTCC
TGGCCTGAGGAGAGAAACCCGGCGACATCGATGACTGTGGTGAACTCCTTGGGGAGCAAT
CCGGGTTTGTGGACCCCGGCCTTGGCATTGGCCAGACCGACAAAGCAGAAGAAAGGCAGG
GTGAGCG



Homology of Contig U35_48731 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None