barSeed - Barley Seed Development Database

Probe ABC09582

Source Contig ABC09582

barSeed

Links

Affymetrix Source Sequence (878 bp)

>ABC09582 878
CGCGGGCACCCTACGGAGCAGCAGCGCGCGTCCACATTGTCGCCGTTATCCACTCACCCG
CGGCATCCTCTCGCCGTCGCCCGCTGCTCCGCCCGCCGGACTCCGCCGCCCGCCGCCGCA
GCCACCGGCAGGGAGGCTGCTTCCTGGGCCGGCGCCGTGCCATGGAAGAAGGCCGCCGTC
TCCGGCGCGCTCGCGCTCACCCTGTCCTTCTCCTGCTTTGTTGGTCTGGTGAATGCCAAG
GCCGGGGTCAACAAACCCGAGTTGCTCCCCAAGGAGTTCACCACCGTCATCGACGTCGCC
GGTTTCCTCTCTTCAGGCCAGGAAAATCGTATACGCCAAGAGATAGAAGACCTAGAGAAG
GACACTGGGTATAAGTTGAGAGTTCTCGCACAAAATTATCCGGATACACCAGGATTGGCT
ATCAAGGATTTTTGGCAAGTTGATGACCGAACTATTGTCTTTGTTGCAGATCCCACCTTC
GGTAACATTATAAATTTCAACATTGGTTCATTGATTGATCTAGACATTCCTCAGAGCTTC
TGGAGTCGGGTTGCAGGGAAGTATGGAAACATGTTCTATTGGAAAGAAAAGGGAGAGGAT
GCGTCAATTGAAGGCGCCGTGACGGCAATATCGCGCTGCCTGAGAGAGCCCACAGGGGCA
AGTAATTGTTCCGAGGTATTTTAGAGGTGGACGTTCATCGGGGAAGGACTGAGACATGAC
GAACGTAAGACCAGTGAAAACTATATGTACATAATTGAAATGTCAGTTACATAAACTGAA
CATGTTTTCACCTTAATTTTTGAAAGTCAAAGGACATTCGTTTAAAAAAAAAAAAAAATA
AGACGTGGTAAAACGACGGCCAGTTGCAGTAGGAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_57507.2	1099	0.0	76 - 898	99	814 / 824	None	ABC09582
MLOC_57507.1	998	0.0	241 - 963	99	720 / 724	None	ABC09582
AK365586	3055	7e-95	2645 - 2893	92	230 / 250	CUST_42255_PI390587928 CUST_23620_PI390587928 CUST_25002_PI390587928 CUST_5468_PI390587928	ABC08511 ABC09582 ABC12319 ABC15629 ABC24189 ABC26165 ABC40107 ABC40364 ABC40947
AK364221	2939	2e-91	2486 - 2734	91	228 / 250	CUST_42255_PI390587928 CUST_23620_PI390587928 CUST_25002_PI390587928 CUST_5468_PI390587928	ABC08511 ABC09582 ABC12319 ABC15629 ABC24189 ABC26165 ABC40107 ABC40364 ABC40947
MLOC_82051.3	189	2e-75	1 - 181	95	172 / 181	None	ABC09582
MLOC_82051.4	361	4e-67	1 - 163	95	155 / 163	None	ABC09582
MLOC_82051.6	211	1e-57	1 - 143	95	136 / 143	None	ABC09582