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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2725_PI390587928Hv_44K_v2AACAGACTGATTCAACTGAAACTCATGGCCATAGTAGCAGCAGCAGCAGCAGCATACATT34GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK251236.115497e-231451 - 15109859 / 60minus ABC00268 ABC00278 ABC00393 ABC00431 ABC00654 ABC00816 ABC00903 ABC25612 ABC37216 ABC38668
MLOCMLOC_60734.313167e-23903 - 9629859 / 60plus ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
MLOCMLOC_60734.214517e-231038 - 10979859 / 60plus ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
MLOCMLOC_60734.59707e-23469 - 5289859 / 60plus ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
JLOC1JLOC1_39632.116524e-23355 - 4149859 / 60minus
Harvest21ABC381206263e-2583 - 14210060 / 60plus
Harvest21ABC372164693e-2548 - 10710060 / 60plusABC37216
Harvest21ABC0027817023e-251440 - 149910060 / 60minusABC00278
Harvest21ABC002685233e-2535 - 9410060 / 60plusABC00268
Harvest35U35_1420518333e-251480 - 153910060 / 60minus
Harvest35U35_142025233e-2535 - 9410060 / 60plus



Contig Sequence (523 bp)

>U35_14202 523 Hv_44K_v2
TTTTTTTTTTTTTTTTTGGAAACATCAGGTTGAGAACAGACTGATTCAACTGAAACTCAT
GGCCATAGTAGCAGCAGCAGCAGCAGCATACATTGCTGCCGAAAAAGAGCTCGTAGTACA
ACCACTTCTCCGGTAAGGTAATTACAGATATACATAACTAATATTACGCTACTTTGGCCA
AGGAAGGCGAAACCGCAGACGATGATACATGGAAGTGTATTACCATCACCGATGATCTGG
TTCAGAAGCCGGCCCCCAGCGCTTATTACATCGGAGCGATCAGAAGCACTTGAGGAGGAC
GCCTAGTTGTCCATGCGGATGATGCAACCTGGTGTTGTGCTCGGAACCTACCTTGCTCTG
ATGACAGTGGTCTTCTTCTGGATCATCCACAGGACCGACTTCTTCACAAACAAATTCGGT
GTCAGGTCAATCAGGGAAAATGAAACTGAGAAGATGTCTGCACTGTACCTCCAAGTCAGT
ATTGTGAGCCAGGCTCTTATCTTTGTGACTCGTTCTCGCAGCT



Homology of Contig U35_14202 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None