barSeed - Barley Seed Development Database

Probe ABC12084

Source Contig ABC12084

barSeed

Links

Affymetrix Source Sequence (735 bp)

>ABC12084 735
GCAAAAGGCAAAACTGTGGCCCGTGCACGCTGGTCAAAAGGCAAACCAGGCCCGTGATGA
TACTACTACTACACGTCCCAGTGAACCAACGATTGATGTTAGACGCAGTGACGGAGCCGT
CAGAACAGCGACGACGACATCCGTCAGGACCACACGAAGCTTCCCAGCCTTCGTCTCGGG
GCAACACGCACCACGCCTTCTCCTCCCTATAAATGCAGCCACCACCACAAGACCATCACA
GCAACACAAGCTGAGTGAGGCGACGCAGACATCAAGCCAGAAACTGCTCGCTTTAAGAGA
AATATGGTGCTGGGCATGAACTGCTTCGGCGCTCCTGAAGCTGCAAGGAAGGTGTCGCCG
GCGAGCAGGGGACTCGGAGGAGAGGGAGCGGAGGCCGTGGAGCGGAAAGCAGCGGTGGTG
AAAGAGGAGGCGCCGAGTGGCCGTGTGGTCGGCGAGGCCAAGCAGATGGGGCGTGGTGAT
CGGGTGACGGCTGCGGGGAAGGAGGAGGAGAAGAAGAAGAGGAGTGGGGCTCCAATTGTG
ATGCACCACTTTCCCTTCCATTCTCGTCCCGGGCTGCTCTGATTCCAACCTCCGTTAGTC
GAGTGGGTCACCGGAATTTTGATGGAGCTTTTTGTCGGCATTTTGTCAGATGGTAGTTTT
ATCTTAGTAGAACTGTACCGTATATATGTGTTAATAATGTCATAAAAGTTCATTTCGGAA
AAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60734.2	1451	0.0	1 - 682	99	677 / 682	CUST_2725_PI390587928 CUST_2722_PI390587928 CUST_27475_PI390587928	ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
MLOC_60734.3	1316	0.0	1 - 676	99	671 / 676	CUST_2725_PI390587928 CUST_27475_PI390587928	ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
MLOC_60734.1	707	0.0	116 - 691	99	571 / 576	CUST_38509_PI390587928	ABC12084
MLOC_60734.5	970	1e-52	1 - 113	100	113 / 113	CUST_2725_PI390587928 CUST_2722_PI390587928 CUST_27475_PI390587928	ABC00268 ABC00278 ABC00431 ABC12084 ABC37216 ABC38668
MLOC_60734.4	693	1e-52	1 - 113	100	113 / 113	CUST_2722_PI390587928	ABC00268 ABC00278 ABC00431 ABC12084 ABC37216