barSeed - Barley Seed Development Database

Probe ABC37753

Source Contig ABC37753

barSeed

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Affymetrix Source Sequence (214 bp)

>ABC37753 214
AGGTGCGGAATCCACCCGAAACGAAGCAATTAGGATGGCTCCCTCCTCCATCCCCCATGT
ATTGTATTGTACTCCCCCCCATTCATGTCAAATGTCCCCCTAATACCGGTTTGCCAAAAG
ACTGGATTAATTGACCCCCCCAAGGCCACCAGCCCCCCTGTTTTTGACTCGTTTTTTTTG
AAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249770.1	2323	2e-64	2123 - 2319	89	176 / 197	CUST_38442_PI390587928 CUST_34716_PI390587928 CUST_38443_PI390587928 CUST_25122_PI390587928	ABC04823 ABC26033 ABC37753
AK353820	2303	2e-59	2006 - 2186	90	162 / 181	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753
MLOC_64492.1	1666	2e-59	475 - 655	90	162 / 181	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC37753 ABC47351
MLOC_64491.1	3866	2e-59	2314 - 2494	90	162 / 181	CUST_38442_PI390587928 CUST_31727_PI390587928 CUST_34716_PI390587928 CUST_38443_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753 ABC47351
MLOC_64491.2	3580	2e-59	2028 - 2208	90	162 / 181	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753 ABC47351
AK372913	2156	8e-59	1977 - 2153	90	159 / 177	CUST_38442_PI390587928 CUST_34716_PI390587928 CUST_38443_PI390587928 CUST_25122_PI390587928	ABC04823 ABC26033 ABC37753