barSeed - Barley Seed Development Database

Probe ABC04824

Source Contig ABC04824

barSeed

Links

Affymetrix Source Sequence (677 bp)

>ABC04824 677
GGTGGCCGGCATTCTGTCAGGGCGATTCCAGCTCCCGTCCGAGGAGGAGATGATGCGAGA
CGTGACGGCCTTCTACTCACGTTTGGGCGCTCGCGGATGGCCCCGAAGATACACCCACAG
ACTGCGAGATCGCGAGGTGCCGCGAAATTCGTCCGAAATAAGATTGTTTTCGTTGCTGTT
CTAGATCGACCCCGGCGAGGTGGGATTTCTCTGTTGACGTTGCTTATGCCTGCAGTTCGA
GAACGAGGACTGGCTCGCGGAGCAATGCCGGCGGGACGGGCCCGAGGAGTGGAGGAGGGA
GATGTTCGCCGCGGCAATAGAGGTCATGGGAGAACGTCCGGAGACCTACCGGGACGAGTG
GGATGGTGGTGACTACGACCATTTGCTGGCCCAAGCAAACCGAGATTTCGCGGCGCATCT
TCCCGCCCCTCTTCGGCCTTGATTGATCGTCGTTCCTTCTTGGTCGAAGTGTCGACGAGA
GAGACAGTGGAACGGAGGTTGAGGAACCCAGAACGCGAATAGGATTACATAGCGATCAGT
AAACACGAAGATGATAAACTGATGAACTCTACTGCTATCCCTTTTGGAGGGCTTTGGTCA
TAAAAGACGAGTCAAGAACAGGTGTGCTGCTGTCCTTGGGTGGTTCAATTAATCCAGTCT
CTTGTCAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64491.1	3866	0.0	2423 - 3091	99	667 / 669	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928 CUST_31727_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753 ABC47351
MLOC_64491.2	3580	0.0	2137 - 2805	99	667 / 669	CUST_38442_PI390587928 CUST_38443_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753 ABC47351
AK360703	991	2e-65	376 - 511	100	136 / 136	CUST_38443_PI390587928 CUST_38442_PI390587928	ABC04820 ABC04823 ABC04824 ABC47351
MLOC_64492.1	1666	2e-65	1018 - 1153	100	136 / 136	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC37753 ABC47351
AK355167	1637	2e-65	1118 - 1253	100	136 / 136	CUST_34415_PI390587928	ABC04820 ABC04824 ABC47351
MLOC_64492.2	771	2e-65	339 - 474	100	136 / 136	None	ABC04820 ABC04824
AK353820	2303	7e-94	2115 - 2301	100	187 / 187	CUST_38443_PI390587928 CUST_38442_PI390587928 CUST_34716_PI390587928	ABC04820 ABC04823 ABC04824 ABC26033 ABC37753