barSeed - Barley Seed Development Database

Probe ABC15825

Source Contig ABC15825

barSeed

Links

Affymetrix Source Sequence (987 bp)

>ABC15825 987
CAAACAATTTGTGAGGTTTCCATTTCATAGGTATACAAATCACATACGAAATTAATATTT
TGAACAGATCACAGAACAAATGAAATTCGCCCAAAAAAACACTAAATTAGTCTATTACAA
TCTTTACACTACTACAACTCAAATATGCCTACTATAGCCTACTATCACAATACATGATAT
GCTACTCTTTGCATATAGGCTTCACGACTTCATGCTTGGCTTCACATTTCACCTATGCAA
AAAATAAGAACAAAATAGCAGCCAATGAGTAAACAAAATAGTATAATATGTACAGGCTGA
CGGTACTAATCGATGAGAACCTTTGGAAGAAGACGTTAAAGCTGAGGATGGAACCTAATT
AATCATGTTATTGTGGAAAACACAACACGTAAATAGTATGCCTAACACTAACCAATATGT
GTTTATGGAGTGACTAAAATAGTCTCACTAGCTAGGATTCTTTTAATGTATAGTATACTG
ACCAGTGAAACTTTAATTAAATTGATCATAGAAATAAAAAGAACTATAAGAATGAGTTCA
TTCAGGCATGTCAAATTTTAAGTACCAGTAAAACAGATCTAAAAATCGAGACCAAGATCA
TCATGCATCAGGATTTTTAATGGGGAATGGTACTTGTTGTCTACAAAATCATGATCATCA
TGCATCAGGTTGACAAATATTCATTAGAATACACACACCAACATGAGGCATGGGCTACAA
CAGCAAAAGTTGTAGTACTAGTTCTATAATAAATCAGATTATCCCCTACGAATTTCAACA
AGGCACATTCTGGGACTTGAAAACATATTGAACAGATTTAAATTGATTTGTTAAGCTACA
GCAACAACAGTTGTACTTGTACTGCTGGAATAAATCAAACGACCTACAAATCTATTCATG
AGCTGAACTGAACAAAACACAGGGGAAAAGAAACAACAGCTACCTAATTGTTAGACGACA
CTGGAATCCTGCCAATGAGGTCATCAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367609	3063	0.0	2308 - 3054	94	709 / 751	CUST_11287_PI390587928	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_30139.1	576	0.0	1 - 576	99	575 / 576	None	ABC15824 ABC15825
MLOC_22304.1	2905	0.0	1 - 676	95	642 / 677	None	ABC15824 ABC15825
MLOC_18268.1	670	0.0	3 - 645	95	613 / 644	None	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_565.1	414	0.0	1 - 414	96	400 / 417	None	ABC15824 ABC15825
MLOC_80664.1	409	0.0	1 - 409	96	392 / 410	None	ABC15824 ABC15825
MLOC_22304.2	2365	9e-149	3 - 329	96	313 / 327	None	ABC15825
MLOC_2113.1	281	6e-146	1 - 281	100	281 / 281	None	ABC15825
MLOC_30954.1	307	1e-133	2 - 307	95	293 / 309	None	ABC15825
MLOC_81515.1	314	1e-132	1 - 314	94	296 / 315	None	ABC15824 ABC15825
MLOC_80316.1	1607	5e-132	1302 - 1607	94	292 / 309	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.2	3302	5e-132	2997 - 3302	94	292 / 309	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.3	1442	5e-132	1137 - 1442	94	292 / 309	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.10	3364	4e-128	3069 - 3364	95	283 / 299	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_48479.1	656	5e-112	1 - 279	93	266 / 287	CUST_24682_PI390587928	ABC15825
MLOC_52495.1	254	6e-111	1 - 254	95	243 / 255	None	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_80316.7	1994	5e-107	1755 - 1994	96	232 / 242	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_29753.1	274	5e-102	1 - 274	92	252 / 274	None	ABC15824 ABC15825
MLOC_63965.1	207	4e-93	1 - 207	97	201 / 208	None	ABC15824 ABC15825
MLOC_1613.1	1593	6e-86	1 - 180	99	178 / 180	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_1613.2	1695	6e-86	1 - 180	99	178 / 180	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_31594.2	1186	1e-82	879 - 1140	88	248 / 283	CUST_28563_PI390587928 CUST_9566_PI390587928	ABC15824 ABC15825 ABC18126
MLOC_28782.1	160	1e-72	1 - 160	98	158 / 162	None	ABC15825
MLOC_81514.1	175	5e-72	1 - 175	95	166 / 175	None	ABC15825
MLOC_31595.1	422	2e-60	164 - 376	86	202 / 234	CUST_28563_PI390587928	ABC15824 ABC15825 ABC18126
MLOC_31594.1	908	2e-60	669 - 881	86	202 / 234	CUST_28563_PI390587928 CUST_9566_PI390587928	ABC15824 ABC15825 ABC18126
MLOC_1613.3	1480	2e-60	1 - 134	99	132 / 134	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_27503.1	135	6e-56	1 - 134	96	129 / 134	None	ABC15825
MLOC_65333.2	7376	4e-53	5538 - 5673	95	129 / 136	CUST_3620_PI390587928	ABC07149 ABC15125 ABC15825