barSeed - Barley Seed Development Database

Probe ABC02503

Source Contig ABC02503

barSeed

Links

Affymetrix Source Sequence (1347 bp)

>ABC02503 1347
CTGCATTTGCATCGCTCGCCTCTCAAAACAGCCAAACCGAACCCCAAAAGCTCGCCGGGA
AACGCAGAGAAAGGAACCGAAGCAAACCCAGCAGCAGAAGGGAGGGGCTGAGCCAGGCAG
CTAGCAATGGCGGCGGACCTGGGCTTCGAGGCGACCGAGCTGCGGCTCGGCCTGCCCGGC
GGCGGCGAGGGGGAGGCCAGGAGCTCCTCCGGCAAGAGGGGCTTCGCCGAGACCATCGAC
CTGAAGCTGAAGCTGGAGCCGGCCGGCGAGGAGGCGCCGGCGGCGGAGGACCGGTCCGAC
GTGGCCGTGGTCGCCGCGGCGGCGGCGGAGGAGGAGCACGAGAAGGCGGCGGCGGACGCC
TGCGTGGGGAAGATGAAGAGGTCGCCCAGCCAGAGCAGCGTCGTCACCACCGCCGCGCTC
CCCGACCCCGCCGAGAAGCCGCGCGCGCCCAAGGCGCAGGTGGTGGGGTGGCCTCCGGTC
CGGTCGTTCCGGAAGAACATCCTGGCGGAGAAGTCGTCGCCGGCGGCTGCGGCGTTCGTC
AAGGTGAGCATGGACGGCGCGCCTTACCTGCGCAAGGTGGACCTCAGCATGTACAAGACC
TACCAGGACCTCTCCAAGGCCCTCGAGAAGATGTTCAGCTCCTTCACCATCGGAAACTGT
GGAACTCAAGGGATGAACGGCATGAACGAGAGCAAGCTGATGGATCTGCTCAACGGATCC
GAGTACGTTCCAACGTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGGGACGTCCCG
TGGGAGATGTTCGTTGAGTCATGCAAGCGCCTTCGGATAATGAAAGGATCAGAAGCTATT
GGCCTTGCACCAAGGGCGATGGAGAAATGCAAGAACAGGAGCTGAGGGGAGGATGTACTA
AATGTTATGCAAGAATCAAAATACCTATAACCTTGCTTGCTCATCCCTGTATCATATTCT
CTGTCCTAAGTCTAAGTCTGTATCTCCTGATCAGTGAAGTCATTTTGGGTTGTGATCTTC
TCTTTTCCAGTCAGTCAGTCCCAAGTCTCATCTTGTTATATACATAAGAAAGAAGAAGCC
AAGAACATGTGAGATGTATCTGTACCTGTCTGCCACATAATTGTGTCTTTTCTTTTTGCT
CTGCTTGTTCTTCCTTTTTTTTTCTCTCTCTCTCTCTCTCTTCTTATGTCTCTTCCTGGC
ACAAAATGCAAAGGCACCCTATTTTTCCTCTTGCGGTTTGAAAATCAAAAGTTGTTTAAT
TATCAGCATGGTGTGAACAAATACTTATTGCAAGTTGTCAAAAAAAAAAAAAATTGTATT
ATGAAGTTTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK353651	1207	0.0	3 - 1205	99	1200 / 1203	CUST_12538_PI390587928	ABC02501 ABC02502 ABC02503
AK370125	1155	0.0	14 - 1155	99	1141 / 1142	CUST_12538_PI390587928	ABC02501 ABC02502 ABC02503
MLOC_73033.1	1360	0.0	1 - 948	99	937 / 948	CUST_12538_PI390587928	ABC02501 ABC02503
MLOC_73033.2	708	0.0	78 - 708	100	631 / 631	CUST_12538_PI390587928	ABC02501 ABC02503
MLOC_1613.4	1349	3e-155	604 - 1041	90	393 / 438	None	ABC02502 ABC02503 ABC13064
MLOC_1613.1	1593	3e-155	844 - 1281	90	393 / 438	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_1613.3	1480	3e-155	729 - 1166	90	393 / 438	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_1613.2	1695	3e-155	946 - 1383	90	393 / 438	None	ABC02502 ABC02503 ABC13064 ABC15825
MLOC_59862.1	1180	1e-138	315 - 1038	80	614 / 771	None	ABC02501 ABC02503
MLOC_2785.1	254	2e-111	3 - 254	96	241 / 252	None	ABC02502 ABC02503
MLOC_65100.1	427	2e-107	216 - 427	100	212 / 212	None	ABC02503
MLOC_59862.2	971	3e-105	200 - 566	86	315 / 367	None	ABC02501 ABC02503