barSeed - Barley Seed Development Database

Probe ABC18126

Source Contig ABC18126

barSeed

Links

Affymetrix Source Sequence (864 bp)

>ABC18126 864
GCAACCGCGTGCGTCGTGGAGGTCGTTCAGGGACTCGCTGAAGGTGCTCGAGTGCAACAT
CCAGCACGCCAACACCCTGGCGTCGGAGTGCTCGAGGCCGACAGCGCCACGCATCGATCC
AGCACGCGGGTCACACTCCACAGGTGCGAGTGGCCGTGCGCGTACGGCCGGGCGGTGGCG
ATGGTGCCGCAGGTGGAGAACCTCGCCGCCGGCCGCGCGCGGCTGGAGGCTGTGAGCGCG
CTGCAGCACGAGTCCTGGGAGGCCCGCGACGTCCATTGGCAGTGTGGCGCCTCCTCAAGG
CGGATGAGAACATGCGGATGTGGGAGGCGACGTGCATGGGTATGGCACAGTAGCCCTGCG
GCGACGGCCGGGTGTTCGCCGAACCCCTAAAGAGTGAAAATGAGAATTTGAAAGATTTTA
TACAAATCTTGGAGCCGGAGAACGAGAAGCTTAAGTGATAGCAGCAATTTTCCCAGTGGC
AAGAGTGCGCGGGCGATGAGGCGCGGCGGAGCGCTGCTCGCGACGACGGGTGGCCTCACT
CCACAGGTTTCCAAGGGGGTTTTATTTATGACAGCCTTGGAGCAGGGAAAACTAACATGC
TACTAAAGCTAACATGGTGAAATGTGAAGCCAAGCGTGAAGTCGTGAAGCCTATATGGAA
AGAGTAGCATATCAATATATTGTAATAGTATACTGTAGTAGGCATATTTGAGTTGTAGTA
GTGTAAAGATTGTAATAGACTAATTTAGTGTTTTTTGGACTAATTTTATTTGTTGTGTGA
TCTGTTCATAATATTGATTTCGTATGTGATTTGTATACCTATGAAATGGAAACCTCCCAA
ATTGTTTGACAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_9108.3	1205	0.0	170 - 717	99	545 / 548	None	ABC18126
MLOC_9108.2	1184	0.0	170 - 696	96	524 / 548	None	ABC18126
MLOC_80316.1	1607	0.0	385 - 919	93	500 / 535	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.2	3302	0.0	385 - 919	93	500 / 535	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_9108.1	1395	0.0	617 - 997	99	379 / 381	None	ABC18126
MLOC_9108.4	1506	2e-81	170 - 337	99	167 / 168	None	ABC18126
MLOC_80316.10	3364	0.0	371 - 815	93	415 / 445	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.9	2882	0.0	372 - 818	93	415 / 447	None	ABC18126
MLOC_80316.3	1442	2e-150	385 - 757	92	345 / 373	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.8	1434	2e-149	373 - 743	92	343 / 371	None	ABC18126
MLOC_80316.4	3375	2e-149	380 - 750	92	343 / 371	None	ABC18126
MLOC_80316.7	1994	7e-70	1208 - 1372	96	158 / 165	CUST_24682_PI390587928	ABC15825 ABC18126
MLOC_80316.5	3028	1e-107	768 - 1015	95	236 / 248	None	ABC18126
MLOC_80316.6	3246	1e-112	375 - 664	92	267 / 290	None	ABC18126
AK377075	1972	7e-105	200 - 504	89	275 / 308	None	ABC11959 ABC18126
AK367609	3063	4e-97	2818 - 3059	93	227 / 243	CUST_11287_PI390587928	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_18268.1	670	7e-90	414 - 650	92	219 / 238	None	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_52495.1	254	9e-84	2 - 221	92	204 / 221	None	ABC15824 ABC15825 ABC18126 ABC20604
MLOC_31595.1	422	1e-57	224 - 381	92	147 / 159	CUST_28563_PI390587928	ABC15824 ABC15825 ABC18126
MLOC_31594.1	908	1e-57	729 - 886	92	147 / 159	CUST_9566_PI390587928 CUST_28563_PI390587928	ABC15824 ABC15825 ABC18126
MLOC_31594.2	1186	1e-57	988 - 1145	92	147 / 159	CUST_28563_PI390587928 CUST_9566_PI390587928	ABC15824 ABC15825 ABC18126