barSeed - Barley Seed Development Database

Probe ABC14804

Source Contig ABC14804

barSeed

Links

Affymetrix Source Sequence (680 bp)

>ABC14804 680
AAAAATTCAGTTACTTGCCATTTGGTGGCGGACCAAGGAAATGTGTAGGTGATATGTTTG
CTACTTTTGAGACTGTGGTAGCAACAGCAATGCTTGTCAAGCGATTTGATTTTCAGATGG
CTCCAGGAGCACCTCCGGTCGAGATGACAACCGGAGCAACGATTCACACAACTAAGGGAC
TGAACATGACTGTTACTCGGAGGATAAAGCCACCTGTAATTCCAAACTTAGAGATGAAAA
TCGTTTCCGATCCAGAAGGAAGCACAAGTTCTACTGCGTCAGTGGCTGTTTCTACTGCTA
GTATTGCATCCGGAGAAGGTCAACAAGTGGAGGTGTCGACAAGTCAAGTGTGATTTATCA
TTTTTGATGCTCAGATTGCAATGAGATACATAATGAGTACGTTCTCATCTCAGTTCTACT
TGGAAATTTAAATAGTTATAGTTCCTTCACATTTGAATTGGTTATATTCTCTGGTATGGG
CATTCATTTGCCTTCCCCCTCCTTTCTCTTGCATTGTCCTTCTGTAGTTTTCGTATGACA
CACTTTATTTACCTGAAGTGCTCAAAGATGTTGTATGTCCAATAAATAAAGGCATATGAG
TGTCTAGGGCAAAGAAACTTTGTTTGCACTTCTCGTTGTTAATCATGAGGTCATATATTT
TATTTAGTAAATTACATTGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10958.1	2750	0.0	1904 - 2298	99	393 / 395	CUST_29346_PI390587928 CUST_6663_PI390587928 CUST_6661_PI390587928 CUST_6660_PI390587928	ABC02358 ABC02360 ABC14804 ABC25340 ABC45454
MLOC_20488.1	229	1e-76	53 - 229	96	170 / 177	None	ABC02360 ABC14804 ABC25340
AK360309	2043	9e-58	1568 - 1707	96	134 / 140	CUST_29792_PI390587928	ABC02360 ABC14804 ABC25340 ABC40037