barSeed - Barley Seed Development Database

Probe ABC40037

Source Contig ABC40037

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Affymetrix Source Sequence (461 bp)

>ABC40037 461
GGTGTTCCCGTGCACTCCGACCACGGTGGAGCCGGTGTCCCCGTGTACTCCTTCTCCGAA
CACGGCGATGCTGCAGGAGTGCAAGGTCCGGCGAGATCCTATTCTTGCGAGGAAAAAGAT
GGAGGCGTCTTCTCGGAAACCATGGAGTGGACCGATTCCAAAGGTCATCTTCAGGGCTAC
CGCCTTGATCTGCACGTGGTCCTTACTCACTCCTGTGGAAACCAGGAAGCCTTTGGTTAC
TGGGTGTGTCCGATGGGAGATGGTAGCTCAGGAAAAAAAAAACCGATATGGATGGCGGCA
TGCTAATAGGATTGGACCTTAGTCCAGTTTTCTTTTATACTCGGTTCTTGGGTGGCCTGA
GCGTCATGTAACTCTTTTTCTTGTTTTTCTGAATGATCGGATCCCTTTATATTTTTACAG
ACTTGTTAGTTATTAATAAAATGGCTGTATGCATCTCTTGA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_32350.1	552	8e-82	198 - 362	100	165 / 165	None	ABC40037
AK376099	2296	3e-66	1954 - 2257	82	253 / 308	CUST_277_PI390587928	ABC25340 ABC40037
AK360309	2043	3e-66	1704 - 2008	82	251 / 305	CUST_29792_PI390587928	ABC02360 ABC14804 ABC25340 ABC40037