barSeed - Barley Seed Development Database

Probe ABC45454

Source Contig ABC45454

barSeed

Links

Affymetrix Source Sequence (275 bp)

>ABC45454 275
AAACAGTGCCCAATGCCCCAGTTTTAATGTTCAAAAAAAAGATCCCCAAATTCCCGATAG
TAAACCCGGCCAATCAAGTAATAGGTATAGTTACCCCCGAAAACGTTTTTTGGGGGTTGG
AGGCCATGTTGAAGTTTTAAAGGGGCAGGAGTCCATGCCCGGGACTTGTGGATCTGTAAA
AAAGGGGGCCCCCGGGACTTTTGAGTACCAGGCAGATCCTAAAAATGTAAAAGTGTTTGT
AGCCTGTATCGCAAAAAAAAGCCTGGGGGCATTTA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10957.2	1524	8e-80	1225 - 1499	86	237 / 275	CUST_29346_PI390587928	ABC02358 ABC02360 ABC45454
MLOC_10957.1	1467	8e-80	1122 - 1396	86	237 / 275	CUST_29346_PI390587928 CUST_6661_PI390587928	ABC02358 ABC02360 ABC45454
AK371248	2660	4e-78	2333 - 2607	86	236 / 275	CUST_29346_PI390587928 CUST_6661_PI390587928	ABC02358 ABC02360 ABC08892 ABC45454
AK251025.1	928	4e-78	580 - 854	86	236 / 275	CUST_29346_PI390587928 CUST_6661_PI390587928	ABC02358 ABC02360 ABC45454
MLOC_10958.1	2750	4e-58	1646 - 1842	87	172 / 197	CUST_29346_PI390587928 CUST_6663_PI390587928 CUST_6661_PI390587928 CUST_6660_PI390587928	ABC02358 ABC02360 ABC14804 ABC25340 ABC45454
MLOC_10957.3	1930	4e-58	1646 - 1842	87	172 / 197	CUST_29346_PI390587928 CUST_6663_PI390587928 CUST_6661_PI390587928 CUST_6660_PI390587928	ABC02358 ABC02360 ABC45454