barSeed
Links



Affymetrix Source Sequence (2120 bp)

>ABC09601 2120
AAGGTAAAAGNAGAATTGGAGAGCATTGGCTGTCGATTAAAACCAGTTGTCGGGTCAAAT
CTGTTTCAAGTCTTGATGGAGCAGCTGGCTACAGAGTCTTGGAGAATGATGGTTCAGTGG
AAACATACGACAGTGTCATCTTTGGGGTCCATGCATCCAATGCTCTCAAATTATTAGGAG
CTGAAGCATCACATCACGAACGAAGAATTCTAGGTGCCTGTCAGTATGTCCAAAGAGATA
TATACCTCCACTGCGATCAAAATTTGATGCCCCGAAAATCATCAGCATGGAGTGCGTGGA
ATTTCCTTGGGACAACTAGTAGGGGTTTTTCTATTACTTACTGGCTAAACCAAATTCAGA
AATTTGAATCGGGCAGGCCTTTCCTGGTGACACTCAATCCCCCTTGTGTTCCGGATCATG
TACTACTTAAATGGAATACAAGCCTTCCTGTTCCGTCTGTGGCCGCGGCGAAGGCTTATC
TTCAGCTTCATCAGATCCAGGGAAAGAGGGGAATATGGTTCTGTGGGGCATATCAAGGTC
ATGGCTTCCATGAAGACGGATTAAAGTCTGGGAAAGCAGCGGCTCAAGGTTTGCTTGGAA
AGAAATGTGAGCTTCTGCTGAACCCAAAGAATATGATTCCATCATGGATTGAGGCTGGGG
CACGCCTTCTAGTTGCAAGATTTTTCAACCAATACATATCCATTGGTAACTTGATATTGG
TCGAAGAAGGAGGTAGTGTGTTCAGCTTTGGTAAAGCTTGCGACAAATGCTGTGTAAAAT
CTGTCATCCAAGTTCATGACCCCTTGTTTTATTGGAAGGTTGCAATAGAAGGAGGCATGG
GCTTGGCAGAATCCTATATTGACGGTTGTTTCTCTGTTCTTGACAAGAGAGAAGGCCTTC
TAAATCTTATCCTGATTCTCATTGCTAACAGAGACGAGCGTAGGAACCGCCGCATTGCCA
GAAAAGGGTTTTGGTTGTCACCCTTCCATGTAATAGCTCAATTGGCATATGCTAAACACT
TTTTGCGCCAGGCAACAAGGAAGAACACTGCAACACAAACTCGTCGAAACATCTCTGAGC
ACTATGATCTTAGTAACGACTTTTTTTCGCTTTTTCTGGATAAATCGATGACTTACTCCT
GTGCAGTTTTCAAGGAGAACGAAAGCTTAGAAGCAGCCCAACAACGTAAACTTAGCCTTC
TAATCAATAAGGCTAAAGTCAAGAGGGAGCATCATGTTCTTGATATCGGTAGCGGCTGGG
GAAGTTTAGCAATAGAAACAGTTAAGCAAACTGGCTGCAAATACACTGGAGTCACTTTAT
CGGCGGAGCAGCATAAATACGCAGAAAGAAAAGTAAGAGAAGCTGGCTTAGAGGACCGCA
TAAATTTTCTGCTGTGCGACTACCGTAAAATACCACCTTTTAAGTATGACGCAATCATAA
GCTGTGGTATGATTGAACATGTTGGCCATGAATACATGGACGAATTTTTTGCTTGCTGTG
AGTCTTACTTGGCTGAAGATGGGATATTGGTCCTCCAGTTCATCTCAGTTCCAGAGGAAC
GGTACGAGCAATACAGAAAAAGGCCAGACTTCATAAAAGAGTACATATTCCCTGGTGGTT
GCCTTCCTTCTTTGGCCCGTATAATGTCTGCCATGACCGCGTCATCAAGGTTCTGCATAG
AGCATGTCGAGAATATTGGGCCCAATTACTACACAACTCTGATGCACTGGAGGGACAACT
TCATGGCCAACAAAGACCAAGTTTTGGCCCTGGGCTTTGATGAAAGGTTCCTCCGTATAT
GGGAGTACTACCTCATATTCTCTGCGGCTGGTTTCAAGTCACGAGCAATTGGAGATTACC
AGGTTGTTTTCTCTCGTCCAGGCAATCGTCGTCTAGGCCAGCCTTGATGGCCGGAGACAA
CATATCCTTCTCCGTTCAGCGGCCGAATCGTTACTTGTCAGTACCGTACGAGATTTTAAT
AAGTCAGTCCTGGAATGATTCGCTCATGCCCGAATCCTACTCAGGTGGTTTGGTGATCTA
TCTTGTTGTTTAACCATGCAATGGTTAGTTTTTCGTGGGAGTGTCTTGTTATCCATCAAT
TAACTAGAATTTTGAGAATT



Probe Sequence's BLAST hits in Barley MLOC transcripts

HitHit LengthE-valuePosition on Hit% IdentityMatchAgilent Probes on MLOCsAffymetrix Probes on MLOCs
MLOC_63588.628760.0687 - 2804992114 / 2121CUST_32590_PI390587928 CUST_5369_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_63588.131840.0953 - 3073992111 / 2121CUST_32590_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_63588.732200.01014 - 3134992111 / 2121CUST_32590_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_63588.332180.0942 - 3059992108 / 2121CUST_32590_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_37138.130610.0769 - 2851931930 / 2084NoneABC09600 ABC09601 ABC15584
MLOC_37138.326460.0494 - 2578931930 / 2086NoneABC09600 ABC09601 ABC15584
MLOC_37138.426450.0493 - 2577931930 / 2086NoneABC09600 ABC09601 ABC15584
MLOC_37138.227570.0664 - 2755921931 / 2093NoneABC09600 ABC09601 ABC15584
MLOC_57906.330100.0183 - 2251881833 / 2076CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 CUST_3263_PI390587928
ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57906.727200.0119 - 2187881833 / 2076CUST_3262_PI390587928
CUST_29842_PI390587928 		ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57906.529550.0127 - 2195881833 / 2076CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 		ABC09600 ABC09601 ABC12308 ABC15584
AK35531328860.0737 - 2677891734 / 1945CUST_3262_PI390587928
CUST_27531_PI390587928 CUST_4037_PI390587928
ABC09600 ABC09601 ABC15584
MLOC_63588.913560.010 - 1313991300 / 1304CUST_32590_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_57906.630360.0120 - 2111881765 / 1999CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 		ABC09600 ABC09601 ABC12308 ABC15584
MLOC_10873.221560.0147 - 2156881781 / 2023NoneABC09600 ABC09601 ABC15584
MLOC_4763.229940.0787 - 2692881685 / 1911CUST_32593_PI390587928 CUST_32591_PI390587928 CUST_1545_PI390587928 ABC09600 ABC09601 ABC15584 ABC37733
MLOC_63588.829910.02048 - 299199940 / 944NoneABC09600 ABC09601 ABC15584
MLOC_63588.529290.01986 - 292999940 / 944NoneABC09600 ABC09601 ABC15584
MLOC_37138.513530.019 - 1285931177 / 1268NoneABC09600 ABC09601 ABC15584
MLOC_63588.432012e-941876 - 2064100189 / 189CUST_32590_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_57906.129659e-167190 - 72587464 / 536CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 CUST_3263_PI390587928
ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57938.222840.0229 - 1609891230 / 1381CUST_27531_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_57938.122810.0229 - 1606891227 / 1378CUST_27531_PI390587928 ABC09600 ABC09601 ABC15584
MLOC_63588.225800.01926 - 258099653 / 655NoneABC09600 ABC09601
MLOC_57906.1020340.018 - 1233881075 / 1218CUST_29675_PI390587928 CUST_29842_PI390587928 ABC09600 ABC09601 ABC12308
MLOC_4763.129510.0315 - 106889675 / 755CUST_32593_PI390587928 CUST_32591_PI390587928 CUST_1545_PI390587928 ABC09600 ABC09601 ABC15584 ABC37733
AK36155530860.0763 - 173089860 / 968CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 CUST_3263_PI390587928
ABC09600 ABC09601 ABC15584
MLOC_57906.231760.01408 - 237589864 / 969CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 CUST_3263_PI390587928
ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57906.830180.01313 - 228089864 / 969CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 		ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57906.429712e-158717 - 118189417 / 471CUST_3262_PI390587928
CUST_29675_PI390587928 CUST_29842_PI390587928 CUST_3263_PI390587928
ABC09600 ABC09601 ABC12308 ABC15584
MLOC_57906.99610.01 - 90389801 / 904NoneABC09600 ABC09601 ABC12308
MLOC_37138.66140.01 - 61196586 / 611NoneABC09600 ABC09601 ABC15584
MLOC_10873.134901e-1361203 - 160189355 / 399NoneABC09600 ABC09601 ABC15584
MLOC_62997.28530.0120 - 68490510 / 569CUST_3262_PI390587928
CUST_4037_PI390587928
ABC09601 ABC15584
MLOC_57938.311051e-180513 - 110586512 / 593NoneABC09600 ABC09601 ABC15584
MLOC_10873.33721e-1452 - 37292341 / 371NoneABC09600 ABC09601 ABC15584
MLOC_62997.18592e-94590 - 85990243 / 270NoneABC09601 ABC15584
MLOC_57938.410556e-949 - 28689248 / 278CUST_27531_PI390587928 ABC09601